Difference between revisions of "AnyWave:CommandLine"
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| − | + | AnyWave allows the user to process data using the command line.<br/> | |
Passing arguments to anywave can be done using the double dash syntax:<br/> | Passing arguments to anywave can be done using the double dash syntax:<br/> | ||
<syntaxhighlight lang='bash'> | <syntaxhighlight lang='bash'> | ||
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'''--run <plugin name>''' start processing data using a plugin. This will required to specify plugin related options.<br/> | '''--run <plugin name>''' start processing data using a plugin. This will required to specify plugin related options.<br/> | ||
| + | <br/> | ||
| + | Example:<br/> | ||
| + | Running h² computation on a seeg data file:<br/> | ||
| + | <syntaxhighlight lang="bash"> | ||
| + | </syntaxhighlight> | ||
Revision as of 16:28, 2 July 2020
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AnyWave allows the user to process data using the command line.
Passing arguments to anywave can be done using the double dash syntax:
anywave --arg1 <value> --arg2 <value> --arg3
An argument may have a value.
There is a list of common arguments that can be used anytime for every command line operation:
--input_file <file> set the file to process.
--input_dir <dir> sets the input directory to use.
--output_dir <dir> sets the output directory. The location where the plugin should generate its results.
--output_file <file> sets the name of the processing output file.
--output_prefix <string> sets the prefix of the output file.
--hp <value> sets the high pass filter value to use.
--lp <value> sets the low pass filter value to use.
--notch <value> sets the notch filter value to use.
--skip_bad_chanels <true|false|yes|no> default is true. Set it false to force anywave to also add bad channels to processing input.
--create_montage <bipolar_ieeg|none> create a montage from data file and use it as input for processing. bipolar_ieeg means seeg alike bipolar. none will force AnyWave to ignore .mtg file that may be present along with the data file.
--use_markers "markers" specify the markers to use for processing. sets --use_markers all_data to force AnyWave to use a global marker for the whole data as input.
--skip_markers "markers" specify the markers to avoid while processing. Can be used with use_markers. if --use_markers all_data is set, this option is ignored.
--run <plugin name> start processing data using a plugin. This will required to specify plugin related options.
Example:
Running h² computation on a seeg data file:
