https://meg.univ-amu.fr/api.php?action=feedcontributions&user=JMBadier&feedformat=atomWikiMEG - User contributions [en]2024-03-29T08:12:00ZUser contributionsMediaWiki 1.22.2https://meg.univ-amu.fr/wiki/JM_BadierJM Badier2020-05-22T16:06:18Z<p>JMBadier: ajout chapitre livre</p>
<hr />
<div>'''Current situation:'''<br />
<br />
Ingénieur de Recherche Hors Classe (Research Engineer). Aix-Marseille University (AMU). <br />
Technical Director of the MEG laboratory.<br />
<br />
<br />
'''Short resume:''' <br />
<br />
JM Badier graduated from Université de Technologie de Compiègne (UTC, engineer 1985, PhD 1991). He has been working at the Brain Research Institute at UCLA, Hôpital Ste Anne Paris (Epilepsy Research INSERM U97) and Rennes 1 University before to join the Aix-Marseille University In 1997 as research engineer (Ingénieur de Recherche).<br />
<br />
He worked on the first MEG platform in France (Rennes 1992). He is a specialist in acquisition and processing of electrophysiological signals. He is in charge of the MEG system of Marseille since the opening of the Marseille platform (2007). <br />
<br />
He is involved in several educational courses, giving lectures in engineering schools and masters. <br />
<br />
He has been member of the scientific council of the University. <br />
<br />
His current research is concerned with cerebral dysfunction in epileptic patients explored by EEG, SEEG and MEG, as well as the test of the new MEG (Col CEA-Leti) and EEG (Col BEL Lab. Ecole des Mines de St Etienne) sensors.<br />
<br />
<br />
'''Publications:'''<br />
<br />
'''2020'''<br />
<br />
Simultaneous recordings of MEG and intracerebral EEG, Bénar Christian-G., Badier Jean-Michel, in Magnetoencephalography: From Signals to Dynamic Cortical Networks, 2nd Edition, edited by Selma Supek and Cheryl J. Aine. <br />
<br />
<br />
'''2019'''<br />
<br />
Strijkers K, Chanoine V, Munding D, Dubarry AS, Trébuchon A, Badier JM, Alario FX. Grammatical class modulates the (left) inferior frontal gyrus within 100 milliseconds when syntactic context is predictive. Sci Rep. 2019 Mar 18;9(1):4830. doi: 10.1038/s41598-019-41376-x.<br />
<br />
<br />
Pizzo F, Roehri N, Medina Villalon S, Trébuchon A, Chen S, Lagarde S, Carron R, Gavaret M, Giusiano B, McGonigal A, Bartolomei F, Badier JM, Bénar CG. Deep brain activities can be detected with magnetoencephalography. Nat Commun. 2019 Feb 27;10(1):971. doi: 10.1038/s41467-019-08665-5.<br />
<br />
<br />
'''2018'''<br />
<br />
Roquet A, Hinault T, Badier JM, Lemaire P. Aging and Sequential Strategy Interference: A Magnetoencephalography Study in Arithmetic Problem Solving. Front Aging Neurosci. 2018 Aug 8;10:232. doi: 10.3389/fnagi.2018.00232. <br />
<br />
<br />
'''2017'''<br />
<br />
Badier JM, Dubarry AS, Gavaret M, Chen S, Trébuchon AS, Marquis P, Régis J, Bartolomei F, Bénar CG, Carron R. Physiol Meas. Technical solutions for simultaneous MEG and SEEG recordings: towards routine clinical use. 2017 Sep 21;38(10):N118-N127. doi: 10.1088/1361-6579/aa7655.<br />
<br />
<br />
Maksymenko K, Giusiano B, Roehri N, Bénar CG, Badier JM. Strategies for statistical thresholding of source localization maps in magnetoencephalography and estimating source extent. J Neurosci Methods. 2017 Oct 1;290:95-104. doi: 10.1016/j.jneumeth.2017.07.015. Epub 2017 Jul 21.<br />
<br />
<br />
Huberfeld G, Trébuchon A, Capelle L, Badier JM, Chen S, Lefaucheur JP, Gavaret M. Preoperative and intraoperative neurophysiological investigations for surgical resections in functional areas. Neurochirurgie. 2017 Jun;63(3):142-149. doi: 10.1016/j.neuchi.2016.10.008. Epub 2017 May 12. <br />
<br />
<br />
Cavalli E, Colé P, Pattamadilok C, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal reorganization of the reading network in adult dyslexia. Cortex. 2017 Jul;92:204-221. doi: 10.1016/j.cortex.2017.04.012. Epub 2017 Apr 24.<br />
<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
<br />
Chanoine V & Badier JM. Techniques de neuroimagerie. in Traité de neurolinguistique. Du cerveau au langage. Pinto S & Sato M edts. Editions Deboeck.<br />
<br />
<br />
Badier JM, Lonjaret T, Leleux P. Sensors: Theory and Innovation. In Brain Computer Interfaces 2. Clercl M, Bougrain L, Lotte F edts. ISTE-Wiley.<br />
<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2016 Jan;29(1):182-92. doi: 10.1007/s10548-015-0445-3.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2020-05-22T16:00:03Z<p>JMBadier: typo</p>
<hr />
<div>'''Current situation:'''<br />
<br />
Ingénieur de Recherche Hors Classe (Research Engineer). Aix-Marseille University (AMU). <br />
Technical Director of the MEG laboratory.<br />
<br />
<br />
'''Short resume:''' <br />
<br />
JM Badier graduated from Université de Technologie de Compiègne (UTC, engineer 1985, PhD 1991). He has been working at the Brain Research Institute at UCLA, Hôpital Ste Anne Paris (Epilepsy Research INSERM U97) and Rennes 1 University before to join the Aix-Marseille University In 1997 as research engineer (Ingénieur de Recherche).<br />
<br />
He worked on the first MEG platform in France (Rennes 1992). He is a specialist in acquisition and processing of electrophysiological signals. He is in charge of the MEG system of Marseille since the opening of the Marseille platform (2007). <br />
<br />
He is involved in several educational courses, giving lectures in engineering schools and masters. <br />
<br />
He has been member of the scientific council of the University. <br />
<br />
His current research is concerned with cerebral dysfunction in epileptic patients explored by EEG, SEEG and MEG, as well as the test of the new MEG (Col CEA-Leti) and EEG (Col BEL Lab. Ecole des Mines de St Etienne) sensors.<br />
<br />
<br />
'''Publications:'''<br />
<br />
'''2019'''<br />
<br />
Strijkers K, Chanoine V, Munding D, Dubarry AS, Trébuchon A, Badier JM, Alario FX. Grammatical class modulates the (left) inferior frontal gyrus within 100 milliseconds when syntactic context is predictive. Sci Rep. 2019 Mar 18;9(1):4830. doi: 10.1038/s41598-019-41376-x.<br />
<br />
<br />
Pizzo F, Roehri N, Medina Villalon S, Trébuchon A, Chen S, Lagarde S, Carron R, Gavaret M, Giusiano B, McGonigal A, Bartolomei F, Badier JM, Bénar CG. Deep brain activities can be detected with magnetoencephalography. Nat Commun. 2019 Feb 27;10(1):971. doi: 10.1038/s41467-019-08665-5.<br />
<br />
<br />
'''2018'''<br />
<br />
Roquet A, Hinault T, Badier JM, Lemaire P. Aging and Sequential Strategy Interference: A Magnetoencephalography Study in Arithmetic Problem Solving. Front Aging Neurosci. 2018 Aug 8;10:232. doi: 10.3389/fnagi.2018.00232. <br />
<br />
<br />
'''2017'''<br />
<br />
Badier JM, Dubarry AS, Gavaret M, Chen S, Trébuchon AS, Marquis P, Régis J, Bartolomei F, Bénar CG, Carron R. Physiol Meas. Technical solutions for simultaneous MEG and SEEG recordings: towards routine clinical use. 2017 Sep 21;38(10):N118-N127. doi: 10.1088/1361-6579/aa7655.<br />
<br />
<br />
Maksymenko K, Giusiano B, Roehri N, Bénar CG, Badier JM. Strategies for statistical thresholding of source localization maps in magnetoencephalography and estimating source extent. J Neurosci Methods. 2017 Oct 1;290:95-104. doi: 10.1016/j.jneumeth.2017.07.015. Epub 2017 Jul 21.<br />
<br />
<br />
Huberfeld G, Trébuchon A, Capelle L, Badier JM, Chen S, Lefaucheur JP, Gavaret M. Preoperative and intraoperative neurophysiological investigations for surgical resections in functional areas. Neurochirurgie. 2017 Jun;63(3):142-149. doi: 10.1016/j.neuchi.2016.10.008. Epub 2017 May 12. <br />
<br />
<br />
Cavalli E, Colé P, Pattamadilok C, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal reorganization of the reading network in adult dyslexia. Cortex. 2017 Jul;92:204-221. doi: 10.1016/j.cortex.2017.04.012. Epub 2017 Apr 24.<br />
<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
<br />
Chanoine V & Badier JM. Techniques de neuroimagerie. in Traité de neurolinguistique. Du cerveau au langage. Pinto S & Sato M edts. Editions Deboeck.<br />
<br />
<br />
Badier JM, Lonjaret T, Leleux P. Sensors: Theory and Innovation. In Brain Computer Interfaces 2. Clercl M, Bougrain L, Lotte F edts. ISTE-Wiley.<br />
<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2016 Jan;29(1):182-92. doi: 10.1007/s10548-015-0445-3.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2020-05-22T15:53:36Z<p>JMBadier: changes CV</p>
<hr />
<div>'''Current situation:'''<br />
<br />
Ingénieur de Recherche Hors Classe (Research Engineer). Aix-Marseille University (AMU). <br />
Technical Director of the MEG laboratory.<br />
<br />
<br />
'''Short resume:''' <br />
<br />
JM Badier graduated from Université de Technologie de Compiègne (UTC, engineer 1985, PhD 1991). He has been working at the Brain Research Institute at UCLA, Hôpital Ste Anne Paris (Epilepsy Research INSERM U97) and Rennes 1 University before to join the Aix-Marseille University In 1997 as research engineer (Ingénieur de Recherche).<br />
<br />
He worked on the first MEG platform in France (Rennes 1992). He is a specialist in acquisition and processing of electrophysiological signals. He is in charge of the MEG system of Marseille since the opening of the Marseille platform (2007). <br />
<br />
He is involved in several educational courses, giving lectures in engineering schools and masters. <br />
<br />
He has been member of the scientific council of the University. <br />
<br />
His current research is concerned with cerebral dysfunction in epileptic patients explored by EEG, SEEG and MEG, as well as the test of the new MEG (Col CEA-Leti) and EEG (Col BEL Lab. Ecole des Mines de St Etienne) sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2019'''<br />
<br />
Strijkers K, Chanoine V, Munding D, Dubarry AS, Trébuchon A, Badier JM, Alario FX. Grammatical class modulates the (left) inferior frontal gyrus within 100 milliseconds when syntactic context is predictive. Sci Rep. 2019 Mar 18;9(1):4830. doi: 10.1038/s41598-019-41376-x.<br />
<br />
<br />
Pizzo F, Roehri N, Medina Villalon S, Trébuchon A, Chen S, Lagarde S, Carron R, Gavaret M, Giusiano B, McGonigal A, Bartolomei F, Badier JM, Bénar CG. Deep brain activities can be detected with magnetoencephalography. Nat Commun. 2019 Feb 27;10(1):971. doi: 10.1038/s41467-019-08665-5.<br />
<br />
<br />
'''2018'''<br />
<br />
Roquet A, Hinault T, Badier JM, Lemaire P. Aging and Sequential Strategy Interference: A Magnetoencephalography Study in Arithmetic Problem Solving. Front Aging Neurosci. 2018 Aug 8;10:232. doi: 10.3389/fnagi.2018.00232. <br />
<br />
<br />
'''2017'''<br />
<br />
Badier JM, Dubarry AS, Gavaret M, Chen S, Trébuchon AS, Marquis P, Régis J, Bartolomei F, Bénar CG, Carron R. Physiol Meas. Technical solutions for simultaneous MEG and SEEG recordings: towards routine clinical use. 2017 Sep 21;38(10):N118-N127. doi: 10.1088/1361-6579/aa7655.<br />
<br />
<br />
Maksymenko K, Giusiano B, Roehri N, Bénar CG, Badier JM. Strategies for statistical thresholding of source localization maps in magnetoencephalography and estimating source extent. J Neurosci Methods. 2017 Oct 1;290:95-104. doi: 10.1016/j.jneumeth.2017.07.015. Epub 2017 Jul 21.<br />
<br />
<br />
Huberfeld G, Trébuchon A, Capelle L, Badier JM, Chen S, Lefaucheur JP, Gavaret M. Preoperative and intraoperative neurophysiological investigations for surgical resections in functional areas. Neurochirurgie. 2017 Jun;63(3):142-149. doi: 10.1016/j.neuchi.2016.10.008. Epub 2017 May 12. <br />
<br />
<br />
Cavalli E, Colé P, Pattamadilok C, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal reorganization of the reading network in adult dyslexia. Cortex. 2017 Jul;92:204-221. doi: 10.1016/j.cortex.2017.04.012. Epub 2017 Apr 24.<br />
<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
<br />
Chanoine V & Badier JM. Techniques de neuroimagerie. in Traité de neurolinguistique. Du cerveau au langage. Pinto S & Sato M edts. Editions Deboeck.<br />
<br />
<br />
Badier JM, Lonjaret T, Leleux P. Sensors: Theory and Innovation. In Brain Computer Interfaces 2. Clercl M, Bougrain L, Lotte F edts. ISTE-Wiley.<br />
<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2016 Jan;29(1):182-92. doi: 10.1007/s10548-015-0445-3.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2020-05-22T15:02:42Z<p>JMBadier: maj biblio</p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). Aix-Marseille University (AMU). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2019'''<br />
<br />
Strijkers K, Chanoine V, Munding D, Dubarry AS, Trébuchon A, Badier JM, Alario FX. Grammatical class modulates the (left) inferior frontal gyrus within 100 milliseconds when syntactic context is predictive. Sci Rep. 2019 Mar 18;9(1):4830. doi: 10.1038/s41598-019-41376-x.<br />
<br />
<br />
Pizzo F, Roehri N, Medina Villalon S, Trébuchon A, Chen S, Lagarde S, Carron R, Gavaret M, Giusiano B, McGonigal A, Bartolomei F, Badier JM, Bénar CG. Deep brain activities can be detected with magnetoencephalography. Nat Commun. 2019 Feb 27;10(1):971. doi: 10.1038/s41467-019-08665-5.<br />
<br />
<br />
'''2018'''<br />
<br />
Roquet A, Hinault T, Badier JM, Lemaire P. Aging and Sequential Strategy Interference: A Magnetoencephalography Study in Arithmetic Problem Solving. Front Aging Neurosci. 2018 Aug 8;10:232. doi: 10.3389/fnagi.2018.00232. <br />
<br />
<br />
'''2017'''<br />
<br />
Badier JM, Dubarry AS, Gavaret M, Chen S, Trébuchon AS, Marquis P, Régis J, Bartolomei F, Bénar CG, Carron R. Physiol Meas. Technical solutions for simultaneous MEG and SEEG recordings: towards routine clinical use. 2017 Sep 21;38(10):N118-N127. doi: 10.1088/1361-6579/aa7655.<br />
<br />
<br />
Maksymenko K, Giusiano B, Roehri N, Bénar CG, Badier JM. Strategies for statistical thresholding of source localization maps in magnetoencephalography and estimating source extent. J Neurosci Methods. 2017 Oct 1;290:95-104. doi: 10.1016/j.jneumeth.2017.07.015. Epub 2017 Jul 21.<br />
<br />
<br />
Huberfeld G, Trébuchon A, Capelle L, Badier JM, Chen S, Lefaucheur JP, Gavaret M. Preoperative and intraoperative neurophysiological investigations for surgical resections in functional areas. Neurochirurgie. 2017 Jun;63(3):142-149. doi: 10.1016/j.neuchi.2016.10.008. Epub 2017 May 12. <br />
<br />
<br />
Cavalli E, Colé P, Pattamadilok C, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal reorganization of the reading network in adult dyslexia. Cortex. 2017 Jul;92:204-221. doi: 10.1016/j.cortex.2017.04.012. Epub 2017 Apr 24.<br />
<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
<br />
Chanoine V & Badier JM. Techniques de neuroimagerie. in Traité de neurolinguistique. Du cerveau au langage. Pinto S & Sato M edts. Editions Deboeck.<br />
<br />
<br />
Badier JM, Lonjaret T, Leleux P. Sensors: Theory and Innovation. In Brain Computer Interfaces 2. Clercl M, Bougrain L, Lotte F edts. ISTE-Wiley.<br />
<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2016 Jan;29(1):182-92. doi: 10.1007/s10548-015-0445-3.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/AnyWave:BIOMAGAnyWave:BIOMAG2020-03-02T14:17:53Z<p>JMBadier: add comment about bad channels</p>
<hr />
<div>__NOTOC__<br />
=BIOMAG 2020 Epilepsy Challenge=<br />
Organizers: Jean-Michel Badier, Christian Bénar, Institut de Neurosciences des Systèmes, Marseille, France.<br />
<br />
In order to obtain the data, please register [[https://meg.univ-amu.fr/biomag2020/download.html '''HERE'''.]]<br />
<br />
Participants are encouraged to also subscribe to this forum where questions related to the datasets will be discussed:<br />
[https://groups.google.com/forum/#!forum/biomag2020-epilepsy-competition forum]<br />
<br />
<br />
==Objectives==<br />
Two datasets of resting state MEG are provided for analysis. The objective of the challenge is to identify, localize and provide network dynamics of the interictal activity for these two patients. These datasets are obtained during simultaneous MEG and intracerebral EEG (Stereo-ElectroEncephaloGraphy, SEEG, Dubarry et al. 2014, Badier et al. 2017, Pizzo et al 2019). Participants need to provide the localization of the sources of abnormal activity as well as (if any) the network dynamics these events (Malinowska et al 2014). Results will be compared to the depth recording.<br />
<br />
==MEG data==<br />
Data have been recorded on two epileptic patients in the Marseille MEG laboratory at Institut de Neuroscience des Systèmes (INS) and Timone Hospital Marseille (Assistance Publique – Hôpitaux de Marseille).<br />
The recording system is a 4D Neuroimaging 3600WH system.<br />
Anonymized raw data sets are supplied. Bad channels are listed in a separate file (bad_channels.txt).<br />
For technical reasons these channels may have locations that do not correspond to the real location of the coils. They have to be discarded.<br />
<br />
==MRI data==<br />
The MRI of the patients are also supplied. In order to preserve the identification of the patients they have been defaced. Coordinates of the fiducial markers are given on the MRI volume in order to match the one used during the MEG recording.<br />
<br />
==Results to supply==<br />
Localization of the sources of epileptic discharges:<br />
* Summary of the localizations with a sublobar resolution.<br />
* Localization of selected discharges. Corresponding time should be provided and given in seconds.<br />
* Identification of the discharges (detection) may also be provided but is optional. Time of detection also to be given in seconds.<br />
<br />
Dynamic of the sources of epileptic discharges:<br />
* If applicable, which is the leading region within the interictal network<br />
* Again, this will be presented as a summary and for a selected set of events.<br />
<br />
Results format is free; however, they should be easy to read and interpret. For instance, graphic figures will be preferred to tables.<br />
<br />
==Evaluation criteria==<br />
<big><br />
* Accuracy of the reconstructed sources at the sublobar level <br />
* Identification of the leading node, if any, in the interictal network.<br />
</big><br />
<br />
==References==<br />
Badier JM, Dubarry AS, Gavaret M, Chen S, Trébuchon AS, Marquis P, Régis J, Bartolomei F, Bénar CG, Carron R.Technical solutions for simultaneous MEG and SEEG recordings: towards routine clinical useJ Phys Meas 2017 Sep 21;38(10):N118-N12 [https://www.ncbi.nlm.nih.gov/pubmed/28933353 pubmed]<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar C. Simultaneous recording of MEG, EEG and intracerebral EEG during visual stimulation: From feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. [https://www.ncbi.nlm.nih.gov/pubmed/24862073 pubmed]<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar C-G. Interictal networks revealed by magnetoencephalography and intracerebral EEG Hum Brain Mapp. 2014 Jun;35(6):2789-805 [https://www.ncbi.nlm.nih.gov/pubmed/24105895 pubmed]<br />
<br />
Pizzo F, Roehri N, Medina Villalon S, Trébuchon A, Chen S, Lagarde S, Carron R, Gavaret M, Giusiano B, McGonigal A, Bartolomei F, Badier JM, Bénar CG. Deep brain activities can be detected with magnetoencephalography. Nat Commun. 2019 Feb 27;10(1):971. [https://www.ncbi.nlm.nih.gov/pubmed/30814498 pubmed]</div>JMBadierhttps://meg.univ-amu.fr/wiki/AnyWave:BIOMAGAnyWave:BIOMAG2020-03-02T14:14:08Z<p>JMBadier: font size</p>
<hr />
<div>__NOTOC__<br />
=BIOMAG 2020 Epilepsy Challenge=<br />
Organizers: Jean-Michel Badier, Christian Bénar, Institut de Neurosciences des Systèmes, Marseille, France.<br />
<br />
In order to obtain the data, please register [[https://meg.univ-amu.fr/biomag2020/download.html '''HERE'''.]]<br />
<br />
Participants are encouraged to also subscribe to this forum where questions related to the datasets will be discussed:<br />
[https://groups.google.com/forum/#!forum/biomag2020-epilepsy-competition forum]<br />
<br />
<br />
==Objectives==<br />
Two datasets of resting state MEG are provided for analysis. The objective of the challenge is to identify, localize and provide network dynamics of the interictal activity for these two patients. These datasets are obtained during simultaneous MEG and intracerebral EEG (Stereo-ElectroEncephaloGraphy, SEEG, Dubarry et al. 2014, Badier et al. 2017, Pizzo et al 2019). Participants need to provide the localization of the sources of abnormal activity as well as (if any) the network dynamics these events (Malinowska et al 2014). Results will be compared to the depth recording.<br />
<br />
==MEG data==<br />
Data have been recorded on two epileptic patients in the Marseille MEG laboratory at Institut de Neuroscience des Systèmes (INS) and Timone Hospital Marseille (Assistance Publique – Hôpitaux de Marseille).<br />
The recording system is a 4D Neuroimaging 3600WH system.<br />
Anonymized raw data sets are supplied. Bad channels are listed in a separate file. <br />
<br />
==MRI data==<br />
The MRI of the patients are also supplied. In order to preserve the identification of the patients they have been defaced. Coordinates of the fiducial markers are given on the MRI volume in order to match the one used during the MEG recording.<br />
<br />
==Results to supply==<br />
Localization of the sources of epileptic discharges:<br />
* Summary of the localizations with a sublobar resolution.<br />
* Localization of selected discharges. Corresponding time should be provided and given in seconds.<br />
* Identification of the discharges (detection) may also be provided but is optional. Time of detection also to be given in seconds.<br />
<br />
Dynamic of the sources of epileptic discharges:<br />
* If applicable, which is the leading region within the interictal network<br />
* Again, this will be presented as a summary and for a selected set of events.<br />
<br />
Results format is free; however, they should be easy to read and interpret. For instance, graphic figures will be preferred to tables.<br />
<br />
==Evaluation criteria==<br />
<big><br />
* Accuracy of the reconstructed sources at the sublobar level <br />
* Identification of the leading node, if any, in the interictal network.<br />
</big><br />
<br />
==References==<br />
Badier JM, Dubarry AS, Gavaret M, Chen S, Trébuchon AS, Marquis P, Régis J, Bartolomei F, Bénar CG, Carron R.Technical solutions for simultaneous MEG and SEEG recordings: towards routine clinical useJ Phys Meas 2017 Sep 21;38(10):N118-N12 [https://www.ncbi.nlm.nih.gov/pubmed/28933353 pubmed]<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar C. Simultaneous recording of MEG, EEG and intracerebral EEG during visual stimulation: From feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. [https://www.ncbi.nlm.nih.gov/pubmed/24862073 pubmed]<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar C-G. Interictal networks revealed by magnetoencephalography and intracerebral EEG Hum Brain Mapp. 2014 Jun;35(6):2789-805 [https://www.ncbi.nlm.nih.gov/pubmed/24105895 pubmed]<br />
<br />
Pizzo F, Roehri N, Medina Villalon S, Trébuchon A, Chen S, Lagarde S, Carron R, Gavaret M, Giusiano B, McGonigal A, Bartolomei F, Badier JM, Bénar CG. Deep brain activities can be detected with magnetoencephalography. Nat Commun. 2019 Feb 27;10(1):971. [https://www.ncbi.nlm.nih.gov/pubmed/30814498 pubmed]</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2017-09-22T09:26:45Z<p>JMBadier: </p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). Aix-Marseille University (AMU). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2017'''<br />
<br />
Badier JM, Dubarry AS, Gavaret M, Chen S, Trébuchon AS, Marquis P, Régis J, Bartolomei F, Bénar CG, Carron R. Physiol Meas. Technical solutions for simultaneous MEG and SEEG recordings: towards routine clinical use. 2017 Sep 21;38(10):N118-N127. doi: 10.1088/1361-6579/aa7655.<br />
<br />
<br />
Maksymenko K, Giusiano B, Roehri N, Bénar CG, Badier JM. Strategies for statistical thresholding of source localization maps in magnetoencephalography and estimating source extent. J Neurosci Methods. 2017 Oct 1;290:95-104. doi: 10.1016/j.jneumeth.2017.07.015. Epub 2017 Jul 21.<br />
<br />
<br />
Huberfeld G, Trébuchon A, Capelle L, Badier JM, Chen S, Lefaucheur JP, Gavaret M. Preoperative and intraoperative neurophysiological investigations for surgical resections in functional areas. Neurochirurgie. 2017 Jun;63(3):142-149. doi: 10.1016/j.neuchi.2016.10.008. Epub 2017 May 12. <br />
<br />
<br />
Cavalli E, Colé P, Pattamadilok C, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal reorganization of the reading network in adult dyslexia. Cortex. 2017 Jul;92:204-221. doi: 10.1016/j.cortex.2017.04.012. Epub 2017 Apr 24.<br />
<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
<br />
Chanoine V & Badier JM. Techniques de neuroimagerie. in Traité de neurolinguistique. Du cerveau au langage. Pinto S & Sato M edts. Editions Deboeck.<br />
<br />
<br />
Badier JM, Lonjaret T, Leleux P. Sensors: Theory and Innovation. In Brain Computer Interfaces 2. Clercl M, Bougrain L, Lotte F edts. ISTE-Wiley.<br />
<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2016 Jan;29(1):182-92. doi: 10.1007/s10548-015-0445-3.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2017-09-14T13:16:46Z<p>JMBadier: </p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). Aix-Marseille University (AMU). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2017'''<br />
<br />
Maksymenko K, Giusiano B, Roehri N, Bénar CG, Badier JM. Strategies for statistical thresholding of source localization maps in magnetoencephalography and estimating source extent. J Neurosci Methods. 2017 Oct 1;290:95-104. doi: 10.1016/j.jneumeth.2017.07.015. Epub 2017 Jul 21.<br />
<br />
<br />
Huberfeld G, Trébuchon A, Capelle L, Badier JM, Chen S, Lefaucheur JP, Gavaret M. Preoperative and intraoperative neurophysiological investigations for surgical resections in functional areas. Neurochirurgie. 2017 Jun;63(3):142-149. doi: 10.1016/j.neuchi.2016.10.008. Epub 2017 May 12. <br />
<br />
<br />
Cavalli E, Colé P, Pattamadilok C, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal reorganization of the reading network in adult dyslexia. Cortex. 2017 Jul;92:204-221. doi: 10.1016/j.cortex.2017.04.012. Epub 2017 Apr 24.<br />
<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
<br />
Chanoine V & Badier JM. Techniques de neuroimagerie. in Traité de neurolinguistique. Du cerveau au langage. Pinto S & Sato M edts. Editions Deboeck.<br />
<br />
<br />
Badier JM, Lonjaret T, Leleux P. Sensors: Theory and Innovation. In Brain Computer Interfaces 2. Clercl M, Bougrain L, Lotte F edts. ISTE-Wiley.<br />
<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2016 Jan;29(1):182-92. doi: 10.1007/s10548-015-0445-3.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2017-02-28T14:17:40Z<p>JMBadier: maj publis</p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). Aix-Marseille University (AMU). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2017'''<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
<br />
Chanoine V & Badier JM. Techniques de neuroimagerie. in Traité de neurolinguistique. Du cerveau au langage. Pinto S & Sato M edts. Editions Deboeck.<br />
<br />
<br />
Badier JM, Lonjaret T, Leleux P. Sensors: Theory and Innovation. In Brain Computer Interfaces 2. Clercl M, Bougrain L, Lotte F edts. ISTE-Wiley.<br />
<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2016 Jan;29(1):182-92. doi: 10.1007/s10548-015-0445-3.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2017-02-28T14:07:06Z<p>JMBadier: maj publications</p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). Aix-Marseille University (AMU). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2017'''<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2016 Jan;29(1):182-92. doi: 10.1007/s10548-015-0445-3.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2017-02-28T13:51:34Z<p>JMBadier: </p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). Aix-Marseille University (AMU). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2017'''<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2017-02-28T13:48:07Z<p>JMBadier: </p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2017'''<br />
<br />
Hinault T, Badier JM, Baillet S, Lemaire P. The Sources of Sequential Modulations of Control Processes in Arithmetic Strategies: A Magnetoencephalography Study. J Cogn Neurosci. 2017 Feb 14:1-11. doi: 10.1162/jocn_a_01102.<br />
<br />
<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias. Dynamic reconfiguration of visuomotor-related functional connectivity networks. Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
'''2016'''<br />
<br />
Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG. Brain Topogr. 2016 Sep;29(5):752-65<br />
<br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition. J Cogn Neurosci. 2016 Aug;28(8):1228-42. doi: 10.1162/jocn_a_00959.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, 2016 Sep 17;4(1):1600247. doi: 10.1002/advs.201600247.<br />
<br />
<br />
'''2015'''<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Rivnay J, Leleux P, Ferro M, Sessolo M, Williamson A, Koutsouras DA, Khodagholy D, Ramuz M, Strakosas X, Owens RM, Benar C, Badier JM, Bernard C, Malliaras GG.High-performance transistors for bioelectronics through tuning of channel thickness. Sci Adv. 2015 May 22;1(4):e1400251. doi: 10.1126/sciadv.1400251.<br />
<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Outils_et_TutoriauxMEG:Outils et Tutoriaux2017-02-07T20:37:47Z<p>JMBadier: </p>
<hr />
<div><br />
= Visualisation des données =<br />
Nous développons un logiciel libre de visualisation et de traitement des données électrophysiologiques (téléchargeable [http://meg.univ-amu.fr/AnyWave/download.html ici]). <br />
<br />
Il permet de visualiser rapidement les données acquises et de marquer les segments de données correspondant à des artefacts (voir pour un exemple [[MEG:pretraitementMEG|Prétraitement des données MEG]])<br />
<br />
= Prétraitement des données électrophysiologiques =<br />
<br />
[[MEG:prétraitement MEG|Prétraitement des données MEG]]<br />
<br />
[[MEG:pretraitement_IRM|Prétraitement des IRM]]<br />
<br />
= Analyse statistique =<br />
<br />
[[MEG:ANOVA dans Fieldtrip|Analyse non paramétrique de données MEG à deux facteurs (groupes et conditions) à deux niveaux chacun]]</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:PrestationsMEG:Prestations2017-02-07T20:35:27Z<p>JMBadier: </p>
<hr />
<div>=Qui peut utiliser la plateforme=<br />
<br />
La plateforme est ouverte à tout utilisateur potentiel soumis à une validation du projet.<br />
<br />
=Description de la plateforme=<br />
<br />
== Le site ==<br />
<br />
Le centre MEG est localisé au sein du service de neurophysiologie clinique (Service du Pr. Bartolomei) à l'hôpital de la Timone, au 1er étage de l'hôpital adulte (timone 1).<br />
<br />
plan d'accès : https://www.google.com/maps/d/edit?mid=zdWM-L6fsJ8A.k2AksGTPjbcY<br />
<br />
== Le capteur ==<br />
Le laboratoire est équipé d’un système MEG 4D-Neuroimaging installé dans une chambre d’isolation magnétique. <br />
Il comprend en particulier pour l’acquisition des données : <br />
* 248 détecteurs des champs magnétiques, configurés en magnétomètres et 23 capteurs utilisés pour la compensation du bruit résiduel à l’intérieur de la chambre d’isolation. <br />
* 96 canaux EEG et 8 voies bipolaires pour polygraphie.<br />
* Un système EEG 32 voix monopolaires et 16 voies bipolaires indépendant. Il est utilisable en remplacement du système précédent et sera choisi préférentiellement pour ses qualités et son absence de bruit sur les signaux MEG. <br />
* Un système de localisation de la tête <br />
<br />
==Les outils de stimulation==<br />
Pour la délivrance des stimulations, des systèmes compatibles avec l’environnement MEG :<br />
* Des unités de contrôle des stimulations cognitive/sensorielle équipées de logiciels de stimulation. Trois logiciels sont principalement utilisés dans le laboratoire :<br />
** eprime 1 et [http://www.pstnet.com/eprime.cfm eprime 2]. La version 3 n'a pas encore été utilisée au laboratoire<br />
** [http://www.neurobs.com/ presentation]<br />
** Notre propre programme de stimulation auditive permettant d'envoyer des fichier wav suivant un timing précis avec une grande qualité sonore.<br />
* Interface de stimulation auditive STAX de haute qualité. <br />
* Stimulateurs somesthésiques cutanés par air et électriques.<br />
* Un système de stimulation visuelle avec synchronisation à la milliseconde.<br />
* Un système de recueil des réponses du sujet par clavier digital.<br />
* Un système d’enregistrement de données acoustiques : microphone à capsule piézoélectrique sans perturbation sur le signal MEG.<br />
* Un bornier permettant la connexion d’un système de stimulation ou de recueil d’information annexe fourni par l’expérimentateur. <br />
<br />
<br />
Toute autre solution peut être étudiée, en particulier les solutions de stimulation à base de matlab ou de développement Python. Tout matériel externe peut a priori être inséré dans le dispositif à condition de disposer de sorties au standard TTL et une connectique BNC ou un port parallèle.<br />
<br />
=Support technique et scientifique=<br />
Pour l’analyse des données, des stations de travail équipés :<br />
* Des logiciels de traitement 4D-Neuroimaging.<br />
* Du logiciel [[AnyWave|AnyWave]] pour l'analyse des données continues.<br />
* De Matlab et des boites à outils MEG Fieldtrip et Braisntorm.<br />
* De divers logiciels pour les traitements de base des IRM utilisés pour les localisations anatomiques des sources.<br />
* D’un système d’archivage des données sécurisé.<br />
<br />
<br />
La '''prestation''' comprends l’accès au laboratoire, l’assistance pour la préparation des sujets et la passation des sujets. Le laboratoire peut dans un cadre collaboratif aider à la conception des expérimentations et la mise en place d’outils de traitement des données.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:PrestationsMEG:Prestations2017-02-07T20:32:03Z<p>JMBadier: </p>
<hr />
<div>=Qui peut utiliser la plateforme=<br />
<br />
La plateforme est ouverte à tout utilisateur potentiel soumis à une validation du projet.<br />
<br />
=Description de la plateforme=<br />
<br />
== Le site ==<br />
<br />
Le centre MEG est localisé au sein du service de neurophysiologie clinique (Service du Pr. Bartolomei) à l'hôpital de la Timone, au 1er étage de l'hôpital adulte (timone 1).<br />
<br />
plan d'accès : https://www.google.com/maps/d/edit?mid=zdWM-L6fsJ8A.k2AksGTPjbcY<br />
<br />
== Le capteur ==<br />
Le laboratoire est équipé d’un système MEG 4D-Neuroimaging installé dans une chambre d’isolation magnétique. <br />
Il comprend en particulier pour l’acquisition des données : <br />
* 248 détecteurs des champs magnétiques, configurés en magnétomètres et 23 capteurs utilisés pour la compensation du bruit résiduel à l’intérieur de la chambre d’isolation. <br />
* 96 canaux EEG et 8 voies bipolaires pour polygraphie.<br />
* Un système EEG 32 voix monopolaires et 16 voies bipolaires indépendant. Il est utilisable en remplacement du système précédent et sera choisi préférentiellement pour ses qualités et son absence de bruit sur les signaux MEG. <br />
* Un système de localisation de la tête <br />
<br />
==Les outils de stimulation==<br />
Pour la délivrance des stimulations, des systèmes compatibles avec l’environnement MEG :<br />
* Des unités de contrôle des stimulations cognitive/sensorielle équipées d’un logiciel de stimulation audio et des logiciels ''eprime'' et ''presentation''.<br />
* Interface de stimulation auditive STAX de haute qualité. <br />
* Stimulateurs somesthésiques cutanés par air et électriques.<br />
* Un système de stimulation visuelle avec synchronisation à la milliseconde.<br />
* Un système de recueil des réponses du sujet par clavier digital.<br />
* Un système d’enregistrement de données acoustiques : microphone à capsule piézoélectrique sans perturbation sur le signal MEG.<br />
* Un bornier permettant la connexion d’un système de stimulation ou de recueil d’information annexe fourni par l’expérimentateur. <br />
<br />
* Trois logiciels sont principalement utilisés dans le laboratoire :<br />
** eprime 1 et [http://www.pstnet.com/eprime.cfm eprime 2]. La version 3 n'a pas encore été utilisée au laboratoire<br />
** [http://www.neurobs.com/ presentation]<br />
** Notre propre programme de stimulation auditive permettant d'envoyer des fichier wav suivant un timing précis avec une grande qualité sonore.<br />
Toute autre solution peut être étudiée, en particulier les solutions à base de matlab ou de développement Python. Tout matériel de stimulation peut aussi a priori être inséré dans le dispositif à condition de disposer de sorties au standard TTL et une connectique BNC ou un port parallèle.<br />
<br />
<br />
=Support technique et scientifique=<br />
Pour l’analyse des données, des stations de travail équipés :<br />
* Des logiciels de traitement 4D-Neuroimaging.<br />
* Du logiciel [[AnyWave|AnyWave]] pour l'analyse des données continues.<br />
* De Matlab et des boites à outils MEG Fieldtrip et Braisntorm.<br />
* De divers logiciels pour les traitements de base des IRM utilisés pour les localisations anatomiques des sources.<br />
* D’un système d’archivage des données sécurisé.<br />
<br />
<br />
La '''prestation''' comprends l’accès au laboratoire, l’assistance pour la préparation des sujets et la passation des sujets. Le laboratoire peut dans un cadre collaboratif aider à la conception des expérimentations et la mise en place d’outils de traitement des données.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Origine_et_InstrumentationMEG:Origine et Instrumentation2017-02-07T20:26:34Z<p>JMBadier: </p>
<hr />
<div><br />
La '''magnétoencéphalographie (MEG) ''' est une technique de mesure des champs magnétiques induits par l'activité électrique des neurones du cerveau. Mesure temps réel de l'activité cérébrale, elle est exploitable dans pratiquement tous les domaines qui sont ceux de l'EEG (et potentiels évoqués) avec ses avantages propres. Les champs magnétiques n'étant pas affectés par le lissage dû à la faible conductivité du crâne des potentiels mesurés par l'EEG, la MEG possède une meilleure résolution spatiale, allant de paire avec une meilleure discrimination des rythmes cérébraux et des propriétés intrinsèques supérieures de localisation.<br />
<br />
= Physique de la MEG =<br />
<br />
= Instrumentation =<br />
<br />
= MEG pour quoi =<br />
<br />
= Liens utiles =<br />
- topo de David Cohen[http://www.nmr.mgh.harvard.edu/meg/pdfs/talks/Cleve_Cohen_WithNotes2g.pdf Meg Made Ridiculously Simple]</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:pr%C3%A9traitement_MEGMEG:prétraitement MEG2017-02-07T18:19:14Z<p>JMBadier: </p>
<hr />
<div><br />
Le prétraitement des données va permettre de les mettre en forme pour les analyses de plus haut niveau qui seront effectées (étude des décours temporels, distribution cartographique, localisation des sources, statistique...). <br />
<br />
Le ou les logiciels de prétraitement intègrent les fonctions suivantes :<br />
<br />
- Visualisation<br />
<br />
- Montage<br />
<br />
- Filtrage<br />
<br />
- Rejet des artefacts<br />
<br />
Dans notre laboratoire on utilise le plus souvent la boite à outils matlab [http://www.fieldtriptoolbox.org/ fieldtrip], l'application matlab [http://neuroimage.usc.edu/brainstorm/ Brainstorm], et le logiciel [[AnyWave]] qui, bien que ne possèdant encore pas les fonctionalités des logiciels précédents, permet une relecture rapide et efficace, l'élimination des mauvais canaux et l'identification et rejet des artefacts. Après netoyage les données MEG peuvent ensuite être traitées de façon classique dans fieldtrip par exemple.<br />
<br />
= Prétraitement des données MEG =<br />
<br />
Sur les enregistrements MEG, nous pouvons rencontrer spécifiquement divers types d'artefacts (sur données filtrées à 1 Hz): <br />
* des sauts de SQUID (SQUID jump)<br />
<br />
[[File:squidJump.png|middle|800px]]<br />
<br />
* Capteur MEG plat<br />
[[File:FlatSensor.png|middle|800px]]<br />
<br />
* exemples de capteurs MEG bruités <br />
[[File:capteurBruit1.png|middle|800px]]<br />
<br />
[[File:capteurBruit2.png|middle|800px]]<br />
<br />
Différents outils sont disponibles pour le prétraitement des données MEG (et électrophysiologiques en général)<br />
<br />
[http://www.fieldtriptoolbox.org/tutorial/artifacts Rejet d'artéfact avec Fieldtrip]<br />
<br />
[http://neuroimage.usc.edu/brainstorm/Tutorials/EventMarkers#Adding_events Marquage de segments artefactés avec Brainstorm]<br />
<br />
[[AnyWave:InsertMarkers|identifier un artefact avec Anywave]]</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:pr%C3%A9traitement_MEGMEG:prétraitement MEG2017-02-07T18:15:12Z<p>JMBadier: </p>
<hr />
<div><br />
Le prétraitement des données va permettre de les mettre en forme pour les analyses de plus haut niveau qui seront effectées (étude des décours temporels, distribution cartographique, localisation des sources, statistique...). <br />
<br />
Le ou les logiciels de prétraitement intègrent les fonctions suivantes :<br />
<br />
- Visualisation<br />
<br />
- Montage<br />
<br />
- Filtrage<br />
<br />
- Rejet des artefacts<br />
<br />
Dans notre laboratoire on utilise le plus souvent la boite à outils matlab [http://www.fieldtriptoolbox.org/ fieldtrip], l'application matlab [http://neuroimage.usc.edu/brainstorm/ Brainstorm], et le logiciel [[AnyWave]] qui, bien que ne possèdant encore pas les fonctionalités des logiciels précédents, permet une relecture rapide et efficace, l'élimination des mauvais canaux et l'identification et rejet des artefacts. Après netoyage les données MEG peuvent ensuite être traitées de façon classique dans fieldtrip par exemple.<br />
<br />
= Prétraitement des données MEG =<br />
<br />
Sur les enregistrements MEG, nous pouvons rencontrer spécifiquement divers types d'artefacts (sur données filtrées à 1 Hz): <br />
* des sauts de SQUID (SQUID jump)<br />
<br />
[[File:squidJump.png|middle|800px]]<br />
<br />
* Capteur MEG plat<br />
[[File:FlatSensor.png|middle|800px]]<br />
<br />
* exemples de capteurs MEG bruités <br />
[[File:capteurBruit1.png|middle|800px]]<br />
<br />
[[File:capteurBruit2.png|middle|800px]]<br />
<br />
Différents outils sont disponibles pour le prétraitement des données MEG (et électrophysiologiques en général)<br />
<br />
[http://www.fieldtriptoolbox.org/tutorial/artifacts Rejet d'artéfact avec Fieldtrip]<br />
<br />
[http://neuroimage.usc.edu/brainstorm/Tutorials/EventMarkers#Adding_events Marquage de segments artefactés avec Brainstorm]<br />
<br />
[[http://meg.univ-amu.fr/wiki/AnyWave:InsertMarkers| identifier un artefact avec Anywave]]</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:pretraitement_IRMMEG:pretraitement IRM2017-02-07T18:00:45Z<p>JMBadier: </p>
<hr />
<div>'''Prétraitement des IRM'''<br />
<br />
La localisation des sources nécessite un traitement des IRM dont l'objectif est la création d'un modèle de milieu. <br />
<br />
Dans tous les cas ce traitement comportera un recalage de l'IRM dans le repère patient. <br />
Il pourra comprendre une étape de segmentation pour obtenir la surface de l'intérieur du crâne qui est la plus importante pour la construction d'un modèle de milieu (celui où circulent les courants extracellulaires les plus importants, les courants dans le crâne et le scalp étant négligés.<br />
Enfin le traitement comprend généralement la construction d'un modèle de source, ou encore matrice de gain, qui permet de connaitre la contribution de chacun des générateurs positionnées dans le cerveau (dipôles de source équivalents) et chacun des capteurs.<br />
<br />
<br />
''Traitement de l'IRM avec [http://neuroimage.usc.edu/brainstorm/ Brainstorm]''<br />
<br />
Brainstorm utilise principalement des modèles de sources distribuées le long du manteau cortical. Ceci nécessite donc (lorsque l'on travaille avec l'IRM du sujet) une segmentation fine de l'interface blanc/gris et un maillage de cette surface. Ceci n'est pas assuré par Brainstorm mais par un logiciel tiers. C'est par exemple le cas de [http://surfer.nmr.mgh.harvard.edu/ freesurfer] ou de [http://brainvisa.info/web/index.html brainvisa]. Brainstorm possède un interface pour le recalage du modèle de tête dans le repère patient et assure la mise en forme du modèle (par exemple une décimation des maillages vers une définition raisonnable). On trouvera la procédure à suivre dans le [http://neuroimage.usc.edu/brainstorm/Tutorials/ImportAnatomy tutorial suivant].<br />
<br />
<br />
''Traitement de l'IRM avec [http://www.fieldtriptoolbox.org/ fieldtrip]''<br />
<br />
La préparation des IRM pour fieldtrip est un peu plus délicate. Cependant fieldtrip travaille volontiers avec des modèles volumiques (une grille de points disposés régulièrement ou non dans l'espace cérébral sans lien direct avec l'interface blanc/gris). Fieldtrip générant cette grille directement, l'utilisation d'un logiciel tiers n'est pas nécessaire. Le recalage et la segmentation (pour la surface interne du crâne) est réalisée dans fieldtrip. On trouvera un exemple dans le [http://www.fieldtriptoolbox.org/tutorial/headmodel_meg tutorial suivant].<br />
<br />
<br />
''Préparer une IRM pour fieldtrip avec PreparModel''<br />
<br />
La lecture des IRM d'origine différente et leur préparation dans fieldtrip n'étant pas toujours exempte de "surprises" nous avons développé une interface permettant de préparer une IRM au format DICOM ou NIFTI. Cette interface peut être lancée indépendamment ou depuis Anywave. Cet interface fera l'objet d'un article. Elle est déjà disponible sur demande.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:pretraitement_IRMMEG:pretraitement IRM2017-02-07T17:59:53Z<p>JMBadier: </p>
<hr />
<div>'''Prétraitement des IRM'''<br />
<br />
La localisation des sources nécessite un traitement des IRM dont l'objectif est la création d'un modèle de milieu. <br />
<br />
Dans tous les cas ce traitement comportera un recalage de l'IRM dans le repère patient. <br />
Il pourra comprendre une étape de segmentation pour obtenir la surface de l'intérieur du crâne qui est la plus importante pour la construction d'un modèle de milieu (celui où circulent les courants extracellulaires les plus importants, les courants dans le crâne et le scalp étant négligés.<br />
Enfin le traitement comprend généralement la construction d'un modèle de source, ou encore matrice de gain, qui permet de connaitre la contribution de chacun des générateurs positionnées dans le cerveau (dipôles de source équivalents) et chacun des capteurs.<br />
<br />
<br />
''Traitement de l'IRM avec [http://neuroimage.usc.edu/brainstorm/ Brainstorm]''<br />
<br />
Brainstorm utilise principalement des modèles de sources distribuées le long du manteau cortical. Ceci nécessite donc (lorsque l'on travaille avec l'IRM du sujet) une segmentation fine de l'interface blanc/gris et un maillage de cette surface. Ceci n'est pas assuré par Brainstorm mais par un logiciel tiers. C'est par exemple le cas de [http://surfer.nmr.mgh.harvard.edu/ freesurfer] ou de [http://brainvisa.info/web/index.html brainvisa]. Brainstorm possède un interface pour le recalage du modèle de tête dans le repère patient et assure la mise en forme du modèle (par exemple une décimation des maillages vers une définition raisonnable). On trouvera la procédure à suivre dans le [http://neuroimage.usc.edu/brainstorm/Tutorials/ImportAnatomy tutorial suivant].<br />
<br />
<br />
''Traitement de l'IRM avec [http://www.fieldtriptoolbox.org/ fieldtrip]''<br />
<br />
La préparation des IRM pour fieldtrip est un peu plus délicate. Cependant fieldtrip travaille volontiers avec des modèles volumiques (une grille de points disposés régulièrement ou non dans l'espace cérébral sans lien direct avec l'interface blanc/gris). Fieldtrip générant cette grille directement l'utilisation d'un logiciel tiers n'est pas nécessaire. Le recalage et la segmentation (pour la surface interne du crâne) est réalisée dans fieldtrip. On trouvera des exemples dans le [http://www.fieldtriptoolbox.org/tutorial/headmodel_meg tutorial suivant].<br />
<br />
<br />
''Préparer une IRM pour fieldtrip avec PreparModel''<br />
<br />
La lecture des IRM d'origine différente et leur préparation dans fieldtrip n'étant pas toujours exempte de "surprises" nous avons développé une interface permettant de préparer une IRM au format DICOM ou NIFTI. Cette interface peut être lancée indépendamment ou depuis Anywave. Cet interface fera l'objet d'un article. Elle est déjà disponible sur demande.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Outils_et_TutoriauxMEG:Outils et Tutoriaux2017-02-07T17:53:19Z<p>JMBadier: </p>
<hr />
<div>__NOTITLE__<br />
<br />
= Visualisation des données =<br />
Nous développons un logiciel libre de visualisation et de traitement des données électrophysiologiques (téléchargeable [http://meg.univ-amu.fr/AnyWave/download.html ici]). <br />
<br />
Il permet de visualiser rapidement les données acquises et de marquer les segments de données correspondant à des artefacts (voir pour un exemple [[MEG:pretraitementMEG|Prétraitement des données MEG]])<br />
<br />
= Prétraitement des données électrophysiologiques =<br />
<br />
[[MEG:prétraitement MEG|Prétraitement des données MEG]]<br />
<br />
[[MEG:pretraitement_IRM]]<br />
<br />
= Analyse statistique =<br />
<br />
[[MEG:ANOVA dans Fieldtrip|Analyse non paramétrique de données MEG à deux facteurs (groupes et conditions) à deux niveaux chacun]]</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:pretraitement_IRMMEG:pretraitement IRM2017-02-07T17:51:17Z<p>JMBadier: Created page with "'''Prétraitement des IRM''' La localisation des sources nécessite un traitement des IRM dont l'objectif est la création d'un modèle de milieu. Dans tous les cas ce trai..."</p>
<hr />
<div>'''Prétraitement des IRM'''<br />
<br />
La localisation des sources nécessite un traitement des IRM dont l'objectif est la création d'un modèle de milieu. <br />
<br />
Dans tous les cas ce traitement comportera un recalage de l'IRM dans le repère patient. <br />
Il pourra comprendre une étape de segmentation pour obtenir la surface de l'intérieur du crâne qui est la plus importante pour la construction d'un modèle de milieu (celui où circulent les courants extracellulaires les plus importants, les courants dans le crâne et le scalp étant négligés.<br />
Enfin le traitement comprend généralement la construction d'un modèle de source, ou encore matrice de gain, qui permet de connaitre la contribution de chacun des générateurs positionnées dans le cerveau (dipôles de source équivalents) et chacun des capteurs.<br />
<br />
<br />
''Traitement de l'IRM avec [http://neuroimage.usc.edu/brainstorm/ Brainstorm]''<br />
<br />
Brainstorm utilise principalement des modèles de sources distribuées le long du manteau cortical. Ceci nécessite donc (lorsque l'on travaille avec l'IRM du sujet) une segmentation fine de l'interface blanc/gris et un maillage de cette surface. Ceci n'est pas assuré par Brainstorm mais par un logiciel tiers. C'est par exemple le cas de [http://surfer.nmr.mgh.harvard.edu/ freesurfer] ou de [http://brainvisa.info/web/index.html brainvisa]. Brainstorm possède un interface pour le recalage du modèle de tête dans le repère patient et assure la mise en forme du modèle (par exemple une décimation des maillages vers une définition raisonnable). On trouvera la procédure à suivre dans le [http://neuroimage.usc.edu/brainstorm/Tutorials/ImportAnatomy tutorial suivant].<br />
<br />
<br />
''Traitement de l'IRM avec [http://www.fieldtriptoolbox.org/ fieldtrip]''<br />
<br />
La préparation des IRM pour fieldtrip est un peu plus délicate. Cependant fieldtrip travaille volontiers avec des modèles volumiques (une grille de points disposés régulièrement ou non dans l'espace cérébral sans lien direct avec l'interface blanc/gris). Fieldtrip générant cette grille directement l'utilisation d'un logiciel tiers n'est pas nécessaire. Le recalage et la segmentation (pour la surface interne du crâne) est réalisée dans fieldtrip. On trouvera des exemples dans le [http://www.fieldtriptoolbox.org/tutorial/headmodel_meg tutorial suivant].<br />
<br />
<br />
''Préparer une IRM pour fieldtrip avec PreparModel''<br />
<br />
La lecture des IRM d'origine différente et leur préparation dans fieldtrip n'étant pas toujours exempte de "surprises" nous avons développé une interface permettant de préparer une IRM au format DICOM ou NIFTI. Cette interface peut être lancée indépendamment ou depuis Anywave.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:pr%C3%A9traitement_IRMMEG:prétraitement IRM2017-02-07T17:45:51Z<p>JMBadier: </p>
<hr />
<div>'''Prétraitement des IRM'''<br />
<br />
La localisation des sources nécessite un traitement des IRM dont l'objectif est la création d'un modèle de milieu. <br />
<br />
Dans tous les cas ce traitement comportera un recalage de l'IRM dans le repère patient. <br />
Il pourra comprendre une étape de segmentation pour obtenir la surface de l'intérieur du crâne qui est la plus importante pour la construction d'un modèle de milieu (celui où circulent les courants extracellulaires les plus importants, les courants dans le crâne et le scalp étant négligés.<br />
Enfin le traitement comprend généralement la construction d'un modèle de source, ou encore matrice de gain, qui permet de connaitre la contribution de chacun des générateurs positionnées dans le cerveau (dipôles de source équivalents) et chacun des capteurs.<br />
<br />
<br />
''Traitement de l'IRM avec [http://neuroimage.usc.edu/brainstorm/ Brainstorm]''<br />
<br />
Brainstorm utilise principalement des modèles de sources distribuées le long du manteau cortical. Ceci nécessite donc (lorsque l'on travaille avec l'IRM du sujet) une segmentation fine de l'interface blanc/gris et un maillage de cette surface. Ceci n'est pas assuré par Brainstorm mais par un logiciel tiers. C'est par exemple le cas de [http://surfer.nmr.mgh.harvard.edu/ freesurfer] ou de [http://brainvisa.info/web/index.html brainvisa]. Brainstorm possède un interface pour le recalage du modèle de tête dans le repère patient et assure la mise en forme du modèle (par exemple une décimation des maillages vers une définition raisonnable). On trouvera la procédure à suivre dans le [http://neuroimage.usc.edu/brainstorm/Tutorials/ImportAnatomy tutorial suivant].<br />
<br />
<br />
''Traitement de l'IRM avec [http://www.fieldtriptoolbox.org/ fieldtrip]''<br />
<br />
La préparation des IRM pour fieldtrip est un peu plus délicate. Cependant fieldtrip travaille volontiers avec des modèles volumiques (une grille de points disposés régulièrement ou non dans l'espace cérébral sans lien direct avec l'interface blanc/gris). Fieldtrip générant cette grille directement l'utilisation d'un logiciel tiers n'est pas nécessaire. Le recalage et la segmentation (pour la surface interne du crâne) est réalisée dans fieldtrip. On trouvera des exemples dans le [http://www.fieldtriptoolbox.org/tutorial/headmodel_meg tutorial suivant].<br />
<br />
<br />
''Préparer une IRM pour fieldtrip avec PreparModel''<br />
<br />
La lecture des IRM d'origine différente et leur préparation dans fieldtrip n'étant pas toujours exempte de "surprises" nous avons développé une interface permettant de préparer une IRM au format DICOM ou NIFTI. Cette interface peut être lancée indépendamment ou depuis Anywave.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:pr%C3%A9traitement_IRMMEG:prétraitement IRM2017-02-07T17:40:28Z<p>JMBadier: préparation IRM</p>
<hr />
<div>'''Prétraitement des IRM'''<br />
<br />
La localisation des sources nécessite un traitement des IRM dont l'objectif est la création d'un modèle de milieu. <br />
<br />
Dans tous les cas ce traitement comportera un recalage de l'IRM dans le repère patient. <br />
Il pourra comprendre une étape de segmentation pour obtenir la surface de l'intérieur du crâne qui est la plus importante pour la construction d'un modèle de milieu (celui où circulent les courants extracellulaires les plus importants, les courants dans le crâne et le scalp étant négligés.<br />
Enfin le traitement comprend généralement la construction d'un modèle de source, ou encore matrice de gain, qui permet de connaitre la contribution de chacun des générateurs positionnées dans le cerveau (dipôles de source équivalents) et chacun des capteurs.<br />
<br />
<br />
''Traitement de l'IRM avec [http://neuroimage.usc.edu/brainstorm/ Brainstorm]''<br />
<br />
Brainstorm utilise principalement des modèles de sources distribuées le long du manteau cortical. Ceci nécessite donc (lorsque l'on travaille avec l'IRM du sujet) une segmentation fine de l'interface blanc/gris et un maillage de cette surface. Ceci n'est pas assuré par Brainstorm mais par un logiciel tiers. C'est par exemple le cas de [http://surfer.nmr.mgh.harvard.edu/ freesurfer] ou de [http://brainvisa.info/web/index.html brainvisa]. Brainstorm possède un interface pour le recalage du modèle de tête dans le repère patient et assure la mise en forme du modèle (par exemple une décimation des maillages vers une définition raisonnable). On trouvera la procédure à suivre dans le [http://neuroimage.usc.edu/brainstorm/Tutorials/ImportAnatomy tutorial suivant].<br />
<br />
''Traitement de l'IRM avec [http://www.fieldtriptoolbox.org/ fieldtrip]''<br />
<br />
La préparation des IRM pour fieldtrip est un peu plus délicate. Cependant fieldtrip travaille volontiers avec des modèles volumiques (une grille de points disposés régulièrement ou non dans l'espace cérébral sans lien direct avec l'interface blanc/gris). Fieldtrip générant cette grille directement l'utilisation d'un logiciel tiers n'est pas nécessaire. Le recalage et la segmentation (pour la surface interne du crâne) est réalisée dans fieldtrip. On trouvera des exemples dans le [http://www.fieldtriptoolbox.org/tutorial/headmodel_meg tutorial suivant].</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:PrestationsMEG:Prestations2017-02-06T15:26:18Z<p>JMBadier: </p>
<hr />
<div>=Qui peut utiliser la plateforme=<br />
<br />
La plateforme est ouverte à tout utilisateur potentiel soumis à une validation du projet.<br />
<br />
=Description de la plateforme=<br />
<br />
== Le site ==<br />
<br />
Le centre MEG est localisé au sein du service de neurophysiologie clinique (Service du Pr. Bartolomei) à l'hôpital de la Timone, au 1er étage de l'hôpital adulte (timone 1).<br />
<br />
plan d'accès : https://www.google.com/maps/d/edit?mid=zdWM-L6fsJ8A.k2AksGTPjbcY<br />
<br />
== Le capteur ==<br />
Le laboratoire est équipé d’un système MEG 4D-Neuroimaging installé dans une chambre d’isolation magnétique. <br />
Il comprend en particulier pour l’acquisition des données : <br />
* 248 détecteurs des champs magnétiques, configurés en magnétomètres et 23 capteurs utilisés pour la compensation du bruit résiduel à l’intérieur de la chambre d’isolation. <br />
* 128 canaux EEG et 8 voies bipolaires pour polygraphie.<br />
* Un système d’acquisition des données comprenant un total de 370 canaux d’enregistrement <br />
* Un système de localisation de la tête <br />
<br />
==Les outils de stimulation==<br />
Pour la délivrance des stimulations, des systèmes compatibles avec l’environnement MEG :<br />
* Des unités de contrôle des stimulations cognitive/sensorielle équipées d’un logiciel de stimulation audio et des logiciels ''eprime'' et ''presentation''.<br />
* Interface de stimulation auditive STAX de haute qualité. <br />
* Stimulateurs somesthésiques cutanés par air et électriques.<br />
* Un système de stimulation visuelle avec synchronisation à la milliseconde.<br />
* Un système de recueil des réponses du sujet par clavier digital.<br />
* Un système d’enregistrement de données acoustiques : microphone à capsule piézoélectrique sans perturbation sur le signal MEG.<br />
* Un bornier permettant la connexion d’un système de stimulation ou de recueil d’information annexe fourni par l’expérimentateur. <br />
<br />
* Trois logiciels sont principalement utilisés dans le laboratoire :<br />
** eprime 1 et [http://www.pstnet.com/eprime.cfm eprime 2]. La version 3 n'a pas encore été utilisée au laboratoire<br />
** [http://www.neurobs.com/ presentation]<br />
** Notre propre programme de stimulation auditive permettant d'envoyer des fichier wav suivant un timing précis avec une grande qualité sonore.<br />
Toute autre solution peut être étudiée, en particulier les solutions à base de matlab ou de développement Python. Tout matériel de stimulation peut aussi a priori être inséré dans le dispositif à condition de disposer de sorties au standard TTL et une connectique BNC ou un port parallèle.<br />
<br />
<br />
=Support technique et scientifique=<br />
Pour l’analyse des données, des stations de travail équipés :<br />
* Des logiciels de traitement 4D-Neuroimaging.<br />
* Du logiciel [[AnyWave|AnyWave]] pour l'analyse des données continues.<br />
* De Matlab et des boites à outils MEG Fieldtrip et Braisntorm.<br />
* De divers logiciels pour les traitements de base des IRM utilisés pour les localisations anatomiques des sources.<br />
* D’un système d’archivage des données sécurisé.<br />
<br />
<br />
La '''prestation''' comprends l’accès au laboratoire, l’assistance pour la préparation des sujets et la passation des sujets. Le laboratoire peut dans un cadre collaboratif aider à la conception des expérimentations et la mise en place d’outils de traitement des données.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:pr%C3%A9traitement_MEGMEG:prétraitement MEG2017-02-03T12:55:50Z<p>JMBadier: </p>
<hr />
<div><br />
Le prétraitement des données va permettre de les mettre en forme pour les analyses de plus haut niveau qui seront effectées (étude des décours temporels, distribution cartographique, localisation des sources, statistique...). <br />
<br />
Le ou les logiciels de prétraitement intègrent les fonctions suivantes :<br />
<br />
- Visualisation<br />
<br />
- Montage<br />
<br />
- Filtrage<br />
<br />
- Rejet des artefacts<br />
<br />
Dans notre laboratoire on utilise le plus souvent la boite à outils matlab [http://www.fieldtriptoolbox.org/ fieldtrip], l'application matlab [http://neuroimage.usc.edu/brainstorm/ Brainstorm], et le logiciel [[AnyWave]] qui, bien que ne possèdant encore pas les fonctionalités des logiciels précédents, permet une relecture rapide et efficace, l'élimination des mauvais canaux et l'identification et rejet des artefacts. Après netoyage les données MEG peuvent ensuite être traitées de façon classique dans fieldtrip par exemple.<br />
<br />
= Prétraitement des données MEG =<br />
<br />
Sur les enregistrements MEG, nous pouvons rencontrer spécifiquement divers types d'artefacts (sur données filtrées à 1 Hz): <br />
* des sauts de SQUID (SQUID jump)<br />
<br />
[[File:squidJump.png|middle|800px]]<br />
<br />
* Capteur MEG plat<br />
[[File:FlatSensor.png|middle|800px]]<br />
<br />
* exemples de capteurs MEG bruités <br />
[[File:capteurBruit1.png|middle|800px]]<br />
<br />
[[File:capteurBruit2.png|middle|800px]]<br />
<br />
Différents outils sont disponibles pour le prétraitement des données MEG (et électrophysiologiques en général)<br />
<br />
[http://www.fieldtriptoolbox.org/tutorial/artifacts Rejet d'artéfact avec Fieldtrip]<br />
<br />
[http://neuroimage.usc.edu/brainstorm/Tutorials/EventMarkers#Adding_events Marquage de segments artefactés avec Brainstorm]</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2016-12-15T17:03:56Z<p>JMBadier: </p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2016'''<br />
<br />
Dynamic reconfiguration of visuomotor-related functional connectivity networks<br />
Andrea Brovelli, Jean-Michel Badier, Francesca Bonini, Fabrice Bartolomei, Olivier Coulon and Guillaume Auzias<br />
Journal of Neuroscience 15 December 2016, 1672-16; DOI: https://doi.org/10.1523/JNEUROSCI.1672-16.2016 <br />
<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, & Ziegler JC. Spatio-temporal dynamics of morphological processing in visual word recognition. Journal of Cognitive Neuroscience. In press.<br />
<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, doi: 10.1002/advs.201600247 <br />
<br />
<br />
'''2015'''<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/WelcomeWelcome2016-11-14T08:31:25Z<p>JMBadier: </p>
<hr />
<div><br />
= Events =<br />
<br />
<br />
<!--[[MEG:Formations_et_Animations| '''Prochaine réunion du Club MEG''']]--><br />
<br />
<br><br />
'''Formation Connectivité avec Fieldtrip 21-22 novembre 2016 ''' [[File:Fiche annonce - Connectivité en MEG et EEG - 2016.pdf]]<br />
<br />
http://www.fieldtriptoolbox.org/workshop/marseille2016b<br />
<br />
= The Marseille MEG platform.=<br />
<br />
[[File:MEG figure1.jpg||500px|left]]<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
Magnetoencephalography (MEG) consists in recording brain magnetic activity. This activity is the counterparts of the electrical activity that originate from the brain, the well-known EEG. These techniques are the only ones that are directly related to the neural activity and have enough time resolution to track brain activity. One of the great advantages of the MEG other EEG is the very small effect of the geometry of the different media of the head, especially the skull, on the signal recorded compared to EEG.<br />
<br /><br />
<br />
The MEG laboratory of Marseille uses a 248 magnetometers MEG system (4D Neuroimaging magnes 3600), installed within the Neurophysiology department of Timone hospital (Head: F. Bartolomei). The system was co-financed by: Conseil Régional PACA, Conseil Général 13, Conseil Général 06, Marseille Provence Métropole, INSERM, CNRS, INRIA. It is currently co-financed by Aix-Marseille Université (though France Life Imaging) and INSERM.<br />
<br />
The laboratory is equipped with stimulation apparatus that includes video projection and Stax calibrated system for auditory stimulation. It belongs to the Aix-Marseille University and is accessible to all teams involved in fundamental and clinical brain research.<br />
<br />
The research team of the MEG laboratory is specialized in confronting results of source localization to intracerebral EEG (Dubarry et al 2014, Gavaret et al 2004, Koessler et al 2010), and in designing and optimizing signal processing methods for multimodal functional investigation of human cerebral activity (pathological and physiological) (Jmail et al 2011, Krieg et al 2011).<br />
<br />
=== The AnyWave Software ===<br />
<br />
The MEG laboratory is currently developping a software called Anywave for the visualisation and analysis of electrophysiological data: MEG, EEG, SEEG (developper: Bruno Colombet, with help from M. Woodman, Engineer financed by Fondation pour la recherche medicale).<br /><br />
The guiding principles are modularity and cross-platform portability. <br /><br />
See [[AnyWave]].<br />
<br />
=== Staff ===<br />
[[JM_Badier|Jean-Michel Badier]], technical director<br />
<br />
[https://www.researchgate.net/profile/Christian_Benar Christian Bénar], scientific director<br />
<br />
Sophie Chen, engineer<br />
<br />
Bruno Colombet, software developer<br />
<br />
= Publications =<br />
=== Cognition ===<br />
[https://www.ncbi.nlm.nih.gov/pubmed/27027543 Spatio-temporal dynamics of morphological processing in visual word recognition.] Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, & Ziegler JC. J Cogn Neurosci. 2016 Aug;28(8):1228-42. <br />
<br />
[http://www.tandfonline.com/doi/full/10.1080/23273798.2015.1071857 On the Cortical Dynamics of Word Production : A Review of the MEG Evidence.] Munding, D., Dubarry, A.-S., & Alario, F.-X. Lang Cogn Neurosci. 2016. <br />
<br />
[http://www.tandfonline.com/doi/abs/10.1080/23273798.2016.1153117 MEG studies of word production: What next?]<br />
Munding, D., Dubarry, A.-S., & Alario, F.-X. Lang Cogn Neurosci. 2016. <br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/26377456 Characterization of Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary Visuomotor Mapping.] Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. J Neurosci. 2015 Sep 16;35(37):12643-58.<br />
<br />
<br />
=== Clinical research ===<br />
[https://www.ncbi.nlm.nih.gov/pubmed/27334988 Comparison of Brain Networks During Interictal Oscillations and Spikes on Magnetoencephalography and Intracerebral EEG.] Jmail N, Gavaret M, Bartolomei F, Chauvel P, Badier JM, Bénar CG. Brain Topogr. 2016 Sep;29(5):752-65. <br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/26264375 Ictal Magnetic Source Imaging in Presurgical Assessment.] Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Brain Topogr. 2016 Jan;29(1):182-92.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/25352165 Magnetic source imaging in posterior cortex epilepsies.] Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Brain Topogr. 2015 Jan;28(1):162-71.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24105895 Interictal networks in magnetoencephalography.] Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG. Hum Brain Mapp. 2014 Jun;35(6):2789-805.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24005334 MEG and EEG sensitivity in a case of medial occipital epilepsy.] Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. Brain Topogr. 2014 Jan;27(1):192-6<br />
<br />
<br />
=== methodological developments ===<br />
[http://www.ncbi.nlm.nih.gov/pubmed/25614386 AnyWave: A cross-platform and modular software for visualizing and processing electrophysiological signals.] Colombet B, Woodman M, Badier JM, Bénar CG. J Neurosci Methods. 2015 Jan 19;242C:118-126.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/25262967 Organic electrochemical transistors for clinical applications.] Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P, Malliaras GG. Adv Healthc Mater. 2015 Jan;4(1):142-7.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24862073. Simultaneous recording of MEG, EEG and intracerebral EEG during visual stimulation: from feasibility to single-trial analysis.] Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Neuroimage. 2014 Oct 1;99:548-58.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24106008 Conducting polymer electrodes for electroencephalography.] Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG. Adv Healthc Mater. 2014 Apr;3(4):490-3.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2016-10-23T16:49:46Z<p>JMBadier: </p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2016'''<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, & Ziegler JC. Spatio-temporal dynamics of morphological processing in visual word recognition. Journal of Cognitive Neuroscience. In press.<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, doi: 10.1002/advs.201600247 <br />
<br />
'''2015'''<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1992'''<br />
<br />
A consensus statement on relative merits of EEG and MEG. European Concerted Action on Biomagnetism, Lyon meeting, November 26 and 27, 1991. Anogianakis, JM Badier, G Barrett, S Erné, RICCARDO Fenici, P Fenwick, F Grandori, R Hari, R Ilmoniemi, F Mauguière, D Lehmann, F Perrin, M Peters, G-L Romani, PM Rossini. Electroencephalogr Clin Neurophysiol. 1992 May;82(5):317-9.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2016-10-23T16:40:35Z<p>JMBadier: </p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2016'''<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, & Ziegler JC. Spatio-temporal dynamics of morphological processing in visual word recognition. Journal of Cognitive Neuroscience. In press.<br />
<br />
M. Braendlein, T. Lonjaret, P. Leleux, J-M. Badier, and G. G. Malliaras, Voltage ampli-<br />
fier based on organic electrochemical transistor, Adv. Science, doi: 10.1002/advs.201600247 <br />
<br />
'''2015'''<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Formations_et_AnimationsMEG:Formations et Animations2016-10-13T08:25:39Z<p>JMBadier: </p>
<hr />
<div>__NOTITLE__<br />
= Formations =<br />
<br />
== A venir ==<br />
<br />
'''Formation Connectivité avec Fieldtrip 21-22 novembre 2016 '''[[File:Fiche annonce - Connectivité en MEG et EEG - 2016.pdf]]<br />
<br />
== Formations passées ==<br />
<br />
'''Formation Fieldtrip 11-13 janvier 2016 '''[[File:Formation fieldtrip2016.JPG|40px]]<br><br />
[http://www.fieldtriptoolbox.org/workshop/marseille Programme de la formation et tutoriaux]<br />
<br />
= Le Club MEG =<br />
<br />
=== <span style="color:#4169E1"> Prochaines réunions </span> ===<br />
<br />
<!--'''Lieu''' : salle de réunion, 1er étage hôpital Timone, Service de Neurophysiologie Clinique--><br />
<br />
=== <span style="color:#4169E1"> Précédentes réunions </span> ===<br />
==== Mardi 5 Mai 2016 14h ==== <br />
'''''ANYWAVE: a software for visualizing and processing EEG/SEEG/MEG/xMG data''''' - '''''Bruno Colombet. Institut de Neuroscience des Systèmes (INS-Marseille) ''''' <br/><br />
<br />
==== Mardi 5 Avril 2016 14h ==== <br />
'''''The sources of sequential modulations of control processes in arithmetic strategies: A MEG study ''''' - '''''Thomas Hinault. Laboratoire de Psychologie Cognitive (LPC-Marseille) ''''' <br/><br />
In a wide variety of cognitive domains, cognitive performance is determined by which strategies participants use and how they execute these strategies on current problems. We used magnetoencephalography to identify the brain regions and specific time course of dynamic modulations of executive control processes during strategy execution. Participants performed a computational estimation task in which they were instructed to execute a poorer or a better strategy to estimate results of two-digit multiplication problems. When participants were asked to execute poorer strategies, results revealed two distinct patterns of brain activations, depending on whether the poorer strategy (left inferior frontal junction) or the better strategy (anterior cingulate cortex) was executed on the immediately preceding items. Such differences may be the result of proactive preparation on items following poorer strategy items and reactive adjustments following better strategy items. Of genuine interest, the present findings specify the time course of activations of crucial brain areas for sequential modulations of executive control during arithmetic strategy execution.<br />
<br />
==== Mardi 1 mars 2016 14h ==== <br />
'''''The neurophysiology of proactive and reactive action inhibition ''''' - '''''Stefania Ficarella. Laboratoire de Neurosciences Cognitives (LNC-Marseille) ''''' <br/><br />
Action inhibition is often treated as a unitary concept, but recent studies (Aron et al., 2011; Swick et al., 2011) have shown that different brain circuits are involved in different types of action inhibition (for a review see Ridderinkhof, 2014). Particularly, some research groups have investigated the distinction between selective and global action inhibition (Majid et al., 2012) while others have focused on the distinction between proactive and reactive action inhibition (Cai et al., 2011). In this study we aim at investigating, in the same participants, the neurophysiological underpinnings of global and selective, proactive and reactive action inhibition. To do so, we created a Cued Go/NoGo Simon task that, coupled with Electromyographic (EMG) recordinngs of the muscles involved in the responses, informs us on the levels of (selective and global) motor preparation. We will present preliminary behavioral results and expected MEG results.<br />
<br />
References:<br />
<br />
- Aron, A. R. (2011). From reactive to proactive and selective control: developing a richer model for stopping inappropriate responses. Biological Psychiatry, 69 (12), e55–68.<br />
- Cai, W., Oldenkamp, C. L., & Aron, A. R. (2011). A proactive mechanism for selective suppression of response tendencies. The Journal of Neuroscience, 31(16), 5965–9.<br />
- Majid, D.S.A., Cai, W., George, J.S., Verbruggen, F., Aron, A.R. (2012) Transcranial magnetic stimulation reveals dissociable mechanisms for global versus selective cortico-motor suppression underlying the stopping of action. Cerebral Cortex 22:363–371.<br />
- Ridderinkhof, K.R., van den Wildenberg, W.P.M., Brass, M. (2014) “Don׳t” versus “Won׳t”: Principles, mechanisms, and intention in action inhibition.<br />
Neuropsychologia 65:255–262.<br />
- Swick, D., Ashley, V., & Turken, U. (2011). Are the neural correlates of stopping and not going identical? Quantitative meta-analysis of two response inhibition tasks.<br />
NeuroImage, 56(3), 1655–65. <br/><br/><br />
<br />
==== Mardi 26 Janvier 2016 14h ==== <br />
'''''ANOVA II: Analyse multifactorielle des données MEG/EEG ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
A partir d’un exemple d’expérience impliquant deux groupes et deux conditions, nous montreront comment faire l’équivalent d’une ANOVA sans analyse de variance dans Fieldtrip avec des méthodes non paramétriques utilisant les permutations. L’extension à plus de deux groupes et/ou plus de deux conditions sera expliquée en suivant la démarche de l’analyse de variance. Les limites des tests par permutation pour les analyses de variance multifactorielles seront évoquées. ''Les scripts Matlab/Fieldtrip sont disponibles [[MEG:ANOVA dans Fieldtrip|ici]]''.<br/><br />
<br/><pdf width="400" height="280" page="1">File:ANOVA_II_160126.pdf</pdf>[[Media:ANOVA_II_160126.pdf]]<br/><br />
<br/><br />
<br />
==== Mardi 17 novembre 2015 14h ====<br />
'''''ANOVA I: B A BA de l’ANOVA ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
Entre les tests de comparaison deux à deux et les méthodes de régression, à quoi sert l’analyse de variance (ANalysis Of VAriance) ? Nous vous proposons une introduction pour non statisticiens qui démarre avec un rappel intuitif du principe des tests statistiques et qui démystifie les principaux concepts attachés à ce type d’analyse (facteur, inter groupe, intra groupe, interaction, répété, fixé, aléatoire, emboîté, conditions d’application, …). Bien que non appliquée spécialement aux données MEG/EEG, cette présentation permet de comprendre la présentation suivante sur l’analyse multifactorielle des données MEG/EEG. <br/><br />
<br/><pdf width="400" height="280" page="1">File:B_A_BA_de_l_ANOVA_151117.pdf</pdf>[[Media:B_A_BA_de_l_ANOVA_151117.pdf]]<br/><br />
<br/><br />
<br />
<br />
<br />
= Symposium =</div>JMBadierhttps://meg.univ-amu.fr/wiki/WelcomeWelcome2016-10-13T08:20:55Z<p>JMBadier: </p>
<hr />
<div><br />
== Events == <br />
<br />
<br />
<!--[[MEG:Formations_et_Animations| '''Prochaine réunion du Club MEG''']]--><br />
<br />
<br><br />
'''Formation Connectivité avec Fieldtrip 21-22 novembre 2016 '''[[File:Fiche annonce - Connectivité en MEG et EEG - 2016.pdf]]<br />
<br />
<br />
<br />
== Welcome to the Wiki of the Marseille MEG platform.==<br />
<br />
[[File:MEG figure1.jpg||500px|left]]<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
Magnetoencephalography (MEG) consists in recording brain magnetic activity. This activity is the counterparts of the electrical activity that originate from the brain, the well-known EEG. These techniques are the only ones that are directly related to the neural activity and have enough time resolution to track brain activity. One of the great advantages of the MEG other EEG is the very small effect of the geometry of the different media of the head, especially the skull, on the signal recorded compared to EEG.<br />
<br /><br />
<br />
=== The MEG platform ===<br />
<br />
<br />
The MEG laboratory of Marseille uses a 248 magnetometers MEG system (4D Neuroimaging magnes 3600), installed within the Neurophysiology department of Timone hospital (Head: F. Bartolomei). The system was co-financed by: Conseil Régional PACA, Conseil Général 13, Conseil Général 06, Marseille Provence Métropole, INSERM, CNRS, INRIA. It is currently co-financed by Aix-Marseille Université (though France Life Imaging) and INSERM.<br />
<br />
The laboratory is equipped with stimulation apparatus that includes video projection and Stax calibrated system for auditory stimulation. It belongs to the Aix-Marseille University and is accessible to all teams involved in fundamental and clinical brain research.<br />
<br />
The research team of the MEG laboratory is specialized in confronting results of source localization to intracerebral EEG (Dubarry et al 2014, Gavaret et al 2004, Koessler et al 2010), and in designing and optimizing signal processing methods for multimodal functional investigation of human cerebral activity (pathological and physiological) (Jmail et al 2011, Krieg et al 2011).<br />
<br />
=== The AnyWave Software ===<br />
<br />
The MEG laboratory is currently developping a software called Anywave for the visualisation and analysis of electrophysiological data: MEG, EEG, SEEG (developper: Bruno Colombet, with help from M. Woodman, Engineer financed by Fondation pour la recherche medicale).<br /><br />
The guiding principles are modularity and cross-platform portability. <br /><br />
See [[AnyWave]].<br />
<br />
=== Staff ===<br />
<br />
<br />
[[JM_Badier|Jean-Michel Badier]], technical director<br />
<br />
Christian Bénar, scientific director<br />
<br />
Sophie Chen, engineer<br />
<br />
Bruno Colombet, software developer<br />
<br />
=== Publications ===<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, & Ziegler JC. Spatio-temporal dynamics of morphological processing in visual word recognition. Journal of Cognitive Neuroscience. In press. <br />
<br />
[http://www.tandfonline.com/doi/full/10.1080/23273798.2015.1071857 On the Cortical Dynamics of Word Production : A Review of the MEG Evidence.]<br />
Munding, D., Dubarry, A.-S., & Alario, F.-X. Lang Cogn Neurosci. 2016. <br />
<br />
[http://www.tandfonline.com/doi/abs/10.1080/23273798.2016.1153117 MEG studies of word production: What next?]<br />
Munding, D., Dubarry, A.-S., & Alario, F.-X. Lang Cogn Neurosci. 2016. <br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/27027543 Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition.]<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. J Cogn Neurosci. 2016 Mar 30:1-15<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/26264375 Ictal Magnetic Source Imaging in Presurgical Assessment.] Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Brain Topogr. 2016 Jan;29(1):182-92.<br />
<br />
Brain Topogr. 2016 Jan;29(1):182-92. <br />
[http://www.ncbi.nlm.nih.gov/pubmed/25352165 Magnetic source imaging in posterior cortex epilepsies.] Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Brain Topogr. 2015 Jan;28(1):162-71.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/26377456 Characterization of Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary Visuomotor Mapping.] Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. J Neurosci. 2015 Sep 16;35(37):12643-58.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/25614386 AnyWave: A cross-platform and modular software for visualizing and processing electrophysiological signals.] Colombet B, Woodman M, Badier JM, Bénar CG. J Neurosci Methods. 2015 Jan 19;242C:118-126.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/25262967 Organic electrochemical transistors for clinical applications.] Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P, Malliaras GG. Adv Healthc Mater. 2015 Jan;4(1):142-7.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24862073. Simultaneous recording of MEG, EEG and intracerebral EEG during visual stimulation: from feasibility to single-trial analysis.] Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Neuroimage. 2014 Oct 1;99:548-58.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24106008 Conducting polymer electrodes for electroencephalography.] Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG. Adv Healthc Mater. 2014 Apr;3(4):490-3.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24105895 Interictal networks in magnetoencephalography.] Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG. Hum Brain Mapp. 2014 Jun;35(6):2789-805.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24005334 MEG and EEG sensitivity in a case of medial occipital epilepsy.] Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. Brain Topogr. 2014 Jan;27(1):192-6</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Formations_et_AnimationsMEG:Formations et Animations2016-10-13T08:15:04Z<p>JMBadier: </p>
<hr />
<div>__NOTITLE__<br />
= Formations =<br />
<br />
== A venir ==<br />
<br />
'''Formation Connectivité avec Fieldtrip 21-22 novembre 2016 '''[[File:Fiche annonce - Connectivité en MEG et EEG - 2016.pdf]]<br />
<br />
== Formations passées ==<br />
<br />
'''Formation Fieldtrip 11-13 janvier 2016 '''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
= Le Club MEG =<br />
<br />
=== <span style="color:#4169E1"> Prochaines réunions </span> ===<br />
<br />
<br />
'''Lieu''' : salle de réunion, 1er étage hôpital Timone, Service de Neurophysiologie Clinique<br />
<br />
=== <span style="color:#4169E1"> Précédentes réunions </span> ===<br />
==== Mardi 5 Mai 2016 14h ==== <br />
'''''ANYWAVE: a software for visualizing and processing EEG/SEEG/MEG/xMG data''''' - '''''Bruno Colombet. Institut de Neuroscience des Systèmes (INS-Marseille) ''''' <br/><br />
<br />
==== Mardi 5 Avril 2016 14h ==== <br />
'''''The sources of sequential modulations of control processes in arithmetic strategies: A MEG study ''''' - '''''Thomas Hinault. Laboratoire de Psychologie Cognitive (LPC-Marseille) ''''' <br/><br />
In a wide variety of cognitive domains, cognitive performance is determined by which strategies participants use and how they execute these strategies on current problems. We used magnetoencephalography to identify the brain regions and specific time course of dynamic modulations of executive control processes during strategy execution. Participants performed a computational estimation task in which they were instructed to execute a poorer or a better strategy to estimate results of two-digit multiplication problems. When participants were asked to execute poorer strategies, results revealed two distinct patterns of brain activations, depending on whether the poorer strategy (left inferior frontal junction) or the better strategy (anterior cingulate cortex) was executed on the immediately preceding items. Such differences may be the result of proactive preparation on items following poorer strategy items and reactive adjustments following better strategy items. Of genuine interest, the present findings specify the time course of activations of crucial brain areas for sequential modulations of executive control during arithmetic strategy execution.<br />
<br />
==== Mardi 1 mars 2016 14h ==== <br />
'''''The neurophysiology of proactive and reactive action inhibition ''''' - '''''Stefania Ficarella. Laboratoire de Neurosciences Cognitives (LNC-Marseille) ''''' <br/><br />
Action inhibition is often treated as a unitary concept, but recent studies (Aron et al., 2011; Swick et al., 2011) have shown that different brain circuits are involved in different types of action inhibition (for a review see Ridderinkhof, 2014). Particularly, some research groups have investigated the distinction between selective and global action inhibition (Majid et al., 2012) while others have focused on the distinction between proactive and reactive action inhibition (Cai et al., 2011). In this study we aim at investigating, in the same participants, the neurophysiological underpinnings of global and selective, proactive and reactive action inhibition. To do so, we created a Cued Go/NoGo Simon task that, coupled with Electromyographic (EMG) recordinngs of the muscles involved in the responses, informs us on the levels of (selective and global) motor preparation. We will present preliminary behavioral results and expected MEG results.<br />
<br />
References:<br />
<br />
- Aron, A. R. (2011). From reactive to proactive and selective control: developing a richer model for stopping inappropriate responses. Biological Psychiatry, 69 (12), e55–68.<br />
- Cai, W., Oldenkamp, C. L., & Aron, A. R. (2011). A proactive mechanism for selective suppression of response tendencies. The Journal of Neuroscience, 31(16), 5965–9.<br />
- Majid, D.S.A., Cai, W., George, J.S., Verbruggen, F., Aron, A.R. (2012) Transcranial magnetic stimulation reveals dissociable mechanisms for global versus selective cortico-motor suppression underlying the stopping of action. Cerebral Cortex 22:363–371.<br />
- Ridderinkhof, K.R., van den Wildenberg, W.P.M., Brass, M. (2014) “Don׳t” versus “Won׳t”: Principles, mechanisms, and intention in action inhibition.<br />
Neuropsychologia 65:255–262.<br />
- Swick, D., Ashley, V., & Turken, U. (2011). Are the neural correlates of stopping and not going identical? Quantitative meta-analysis of two response inhibition tasks.<br />
NeuroImage, 56(3), 1655–65. <br/><br/><br />
<br />
==== Mardi 26 Janvier 2016 14h ==== <br />
'''''ANOVA II: Analyse multifactorielle des données MEG/EEG ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
A partir d’un exemple d’expérience impliquant deux groupes et deux conditions, nous montreront comment faire l’équivalent d’une ANOVA sans analyse de variance dans Fieldtrip avec des méthodes non paramétriques utilisant les permutations. L’extension à plus de deux groupes et/ou plus de deux conditions sera expliquée en suivant la démarche de l’analyse de variance. Les limites des tests par permutation pour les analyses de variance multifactorielles seront évoquées. ''Les scripts Matlab/Fieldtrip sont disponibles [[MEG:ANOVA dans Fieldtrip|ici]]''.<br/><br />
<br/><pdf width="400" height="280" page="1">File:ANOVA_II_160126.pdf</pdf>[[Media:ANOVA_II_160126.pdf]]<br/><br />
<br/><br />
<br />
==== Mardi 17 novembre 2015 14h ====<br />
'''''ANOVA I: B A BA de l’ANOVA ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
Entre les tests de comparaison deux à deux et les méthodes de régression, à quoi sert l’analyse de variance (ANalysis Of VAriance) ? Nous vous proposons une introduction pour non statisticiens qui démarre avec un rappel intuitif du principe des tests statistiques et qui démystifie les principaux concepts attachés à ce type d’analyse (facteur, inter groupe, intra groupe, interaction, répété, fixé, aléatoire, emboîté, conditions d’application, …). Bien que non appliquée spécialement aux données MEG/EEG, cette présentation permet de comprendre la présentation suivante sur l’analyse multifactorielle des données MEG/EEG. <br/><br />
<br/><pdf width="400" height="280" page="1">File:B_A_BA_de_l_ANOVA_151117.pdf</pdf>[[Media:B_A_BA_de_l_ANOVA_151117.pdf]]<br/><br />
<br/><br />
<br />
= Formations =<br />
<br />
''' <span style="color:#4169E1"> Formation Fieldtrip 11-13 janvier 2016 </span>'''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
[http://www.fieldtriptoolbox.org/workshop/marseille Programme de la formation et tutoriaux]<br />
<br />
= Symposium =</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Formations_et_AnimationsMEG:Formations et Animations2016-10-13T08:10:47Z<p>JMBadier: </p>
<hr />
<div>__NOTITLE__<br />
= Formations =<br />
'''Formation Fieldtrip 11-13 janvier 2016 '''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
= Le Club MEG =<br />
<br />
=== <span style="color:#4169E1"> Prochaines réunions </span> ===<br />
==== Mardi 5 Mai 2016 14h ==== <br />
'''''ANYWAVE: a software for visualizing and processing EEG/SEEG/MEG/xMG data''''' - '''''Bruno Colombet. Institut de Neuroscience des Systèmes (INS-Marseille) ''''' <br/><br />
<br />
<br />
'''Lieu''' : salle de réunion, 1er étage hôpital Timone, Service de Neurophysiologie Clinique<br />
<br />
=== <span style="color:#4169E1"> Précédentes réunions </span> ===<br />
==== Mardi 5 Avril 2016 14h ==== <br />
'''''The sources of sequential modulations of control processes in arithmetic strategies: A MEG study ''''' - '''''Thomas Hinault. Laboratoire de Psychologie Cognitive (LPC-Marseille) ''''' <br/><br />
In a wide variety of cognitive domains, cognitive performance is determined by which strategies participants use and how they execute these strategies on current problems. We used magnetoencephalography to identify the brain regions and specific time course of dynamic modulations of executive control processes during strategy execution. Participants performed a computational estimation task in which they were instructed to execute a poorer or a better strategy to estimate results of two-digit multiplication problems. When participants were asked to execute poorer strategies, results revealed two distinct patterns of brain activations, depending on whether the poorer strategy (left inferior frontal junction) or the better strategy (anterior cingulate cortex) was executed on the immediately preceding items. Such differences may be the result of proactive preparation on items following poorer strategy items and reactive adjustments following better strategy items. Of genuine interest, the present findings specify the time course of activations of crucial brain areas for sequential modulations of executive control during arithmetic strategy execution.<br />
<br />
==== Mardi 1 mars 2016 14h ==== <br />
'''''The neurophysiology of proactive and reactive action inhibition ''''' - '''''Stefania Ficarella. Laboratoire de Neurosciences Cognitives (LNC-Marseille) ''''' <br/><br />
Action inhibition is often treated as a unitary concept, but recent studies (Aron et al., 2011; Swick et al., 2011) have shown that different brain circuits are involved in different types of action inhibition (for a review see Ridderinkhof, 2014). Particularly, some research groups have investigated the distinction between selective and global action inhibition (Majid et al., 2012) while others have focused on the distinction between proactive and reactive action inhibition (Cai et al., 2011). In this study we aim at investigating, in the same participants, the neurophysiological underpinnings of global and selective, proactive and reactive action inhibition. To do so, we created a Cued Go/NoGo Simon task that, coupled with Electromyographic (EMG) recordinngs of the muscles involved in the responses, informs us on the levels of (selective and global) motor preparation. We will present preliminary behavioral results and expected MEG results.<br />
<br />
References:<br />
<br />
- Aron, A. R. (2011). From reactive to proactive and selective control: developing a richer model for stopping inappropriate responses. Biological Psychiatry, 69 (12), e55–68.<br />
- Cai, W., Oldenkamp, C. L., & Aron, A. R. (2011). A proactive mechanism for selective suppression of response tendencies. The Journal of Neuroscience, 31(16), 5965–9.<br />
- Majid, D.S.A., Cai, W., George, J.S., Verbruggen, F., Aron, A.R. (2012) Transcranial magnetic stimulation reveals dissociable mechanisms for global versus selective cortico-motor suppression underlying the stopping of action. Cerebral Cortex 22:363–371.<br />
- Ridderinkhof, K.R., van den Wildenberg, W.P.M., Brass, M. (2014) “Don׳t” versus “Won׳t”: Principles, mechanisms, and intention in action inhibition.<br />
Neuropsychologia 65:255–262.<br />
- Swick, D., Ashley, V., & Turken, U. (2011). Are the neural correlates of stopping and not going identical? Quantitative meta-analysis of two response inhibition tasks.<br />
NeuroImage, 56(3), 1655–65. <br/><br/><br />
<br />
==== Mardi 26 Janvier 2016 14h ==== <br />
'''''ANOVA II: Analyse multifactorielle des données MEG/EEG ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
A partir d’un exemple d’expérience impliquant deux groupes et deux conditions, nous montreront comment faire l’équivalent d’une ANOVA sans analyse de variance dans Fieldtrip avec des méthodes non paramétriques utilisant les permutations. L’extension à plus de deux groupes et/ou plus de deux conditions sera expliquée en suivant la démarche de l’analyse de variance. Les limites des tests par permutation pour les analyses de variance multifactorielles seront évoquées. ''Les scripts Matlab/Fieldtrip sont disponibles [[MEG:ANOVA dans Fieldtrip|ici]]''.<br/><br />
<br/><pdf width="400" height="280" page="1">File:ANOVA_II_160126.pdf</pdf>[[Media:ANOVA_II_160126.pdf]]<br/><br />
<br/><br />
<br />
==== Mardi 17 novembre 2015 14h ====<br />
'''''ANOVA I: B A BA de l’ANOVA ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
Entre les tests de comparaison deux à deux et les méthodes de régression, à quoi sert l’analyse de variance (ANalysis Of VAriance) ? Nous vous proposons une introduction pour non statisticiens qui démarre avec un rappel intuitif du principe des tests statistiques et qui démystifie les principaux concepts attachés à ce type d’analyse (facteur, inter groupe, intra groupe, interaction, répété, fixé, aléatoire, emboîté, conditions d’application, …). Bien que non appliquée spécialement aux données MEG/EEG, cette présentation permet de comprendre la présentation suivante sur l’analyse multifactorielle des données MEG/EEG. <br/><br />
<br/><pdf width="400" height="280" page="1">File:B_A_BA_de_l_ANOVA_151117.pdf</pdf>[[Media:B_A_BA_de_l_ANOVA_151117.pdf]]<br/><br />
<br/><br />
<br />
= Formations =<br />
<br />
''' <span style="color:#4169E1"> Formation Fieldtrip 11-13 janvier 2016 </span>'''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
[http://www.fieldtriptoolbox.org/workshop/marseille Programme de la formation et tutoriaux]<br />
<br />
= Symposium =</div>JMBadierhttps://meg.univ-amu.fr/wiki/WelcomeWelcome2016-10-13T08:10:30Z<p>JMBadier: </p>
<hr />
<div><br />
== Events == <br />
[[MEG:Formations_et_Animations| '''Prochaine réunion du Club MEG''']]<br />
<br />
<br />
'''Formation Connectivité avec Fieldtrip 21-22 novembre 2016 '''[[File:Fiche annonce - Connectivité en MEG et EEG - 2016.pdf]]<br />
<br />
<br />
<br />
== Welcome to the Wiki of the Marseille MEG platform.==<br />
<br />
[[File:MEG figure1.jpg||500px|left]]<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
Magnetoencephalography (MEG) consists in recording brain magnetic activity. This activity is the counterparts of the electrical activity that originate from the brain, the well-known EEG. These techniques are the only ones that are directly related to the neural activity and have enough time resolution to track brain activity. One of the great advantages of the MEG other EEG is the very small effect of the geometry of the different media of the head, especially the skull, on the signal recorded compared to EEG.<br />
<br /><br />
<br />
=== The MEG platform ===<br />
<br />
<br />
The MEG laboratory of Marseille uses a 248 magnetometers MEG system (4D Neuroimaging magnes 3600), installed within the Neurophysiology department of Timone hospital (Head: F. Bartolomei). The system was co-financed by: Conseil Régional PACA, Conseil Général 13, Conseil Général 06, Marseille Provence Métropole, INSERM, CNRS, INRIA. It is currently co-financed by Aix-Marseille Université (though France Life Imaging) and INSERM.<br />
<br />
The laboratory is equipped with stimulation apparatus that includes video projection and Stax calibrated system for auditory stimulation. It belongs to the Aix-Marseille University and is accessible to all teams involved in fundamental and clinical brain research.<br />
<br />
The research team of the MEG laboratory is specialized in confronting results of source localization to intracerebral EEG (Dubarry et al 2014, Gavaret et al 2004, Koessler et al 2010), and in designing and optimizing signal processing methods for multimodal functional investigation of human cerebral activity (pathological and physiological) (Jmail et al 2011, Krieg et al 2011).<br />
<br />
=== The AnyWave Software ===<br />
<br />
The MEG laboratory is currently developping a software called Anywave for the visualisation and analysis of electrophysiological data: MEG, EEG, SEEG (developper: Bruno Colombet, with help from M. Woodman, Engineer financed by Fondation pour la recherche medicale).<br /><br />
The guiding principles are modularity and cross-platform portability. <br /><br />
See [[AnyWave]].<br />
<br />
=== Staff ===<br />
<br />
<br />
[[JM_Badier|Jean-Michel Badier]], technical director<br />
<br />
Christian Bénar, scientific director<br />
<br />
Sophie Chen, engineer<br />
<br />
Bruno Colombet, software developer<br />
<br />
=== Publications ===<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, & Ziegler JC. Spatio-temporal dynamics of morphological processing in visual word recognition. Journal of Cognitive Neuroscience. In press. <br />
<br />
[http://www.tandfonline.com/doi/full/10.1080/23273798.2015.1071857 On the Cortical Dynamics of Word Production : A Review of the MEG Evidence.]<br />
Munding, D., Dubarry, A.-S., & Alario, F.-X. Lang Cogn Neurosci. 2016. <br />
<br />
[http://www.tandfonline.com/doi/abs/10.1080/23273798.2016.1153117 MEG studies of word production: What next?]<br />
Munding, D., Dubarry, A.-S., & Alario, F.-X. Lang Cogn Neurosci. 2016. <br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/27027543 Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition.]<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. J Cogn Neurosci. 2016 Mar 30:1-15<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/26264375 Ictal Magnetic Source Imaging in Presurgical Assessment.] Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Brain Topogr. 2016 Jan;29(1):182-92.<br />
<br />
Brain Topogr. 2016 Jan;29(1):182-92. <br />
[http://www.ncbi.nlm.nih.gov/pubmed/25352165 Magnetic source imaging in posterior cortex epilepsies.] Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Brain Topogr. 2015 Jan;28(1):162-71.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/26377456 Characterization of Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary Visuomotor Mapping.] Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. J Neurosci. 2015 Sep 16;35(37):12643-58.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/25614386 AnyWave: A cross-platform and modular software for visualizing and processing electrophysiological signals.] Colombet B, Woodman M, Badier JM, Bénar CG. J Neurosci Methods. 2015 Jan 19;242C:118-126.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/25262967 Organic electrochemical transistors for clinical applications.] Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P, Malliaras GG. Adv Healthc Mater. 2015 Jan;4(1):142-7.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24862073. Simultaneous recording of MEG, EEG and intracerebral EEG during visual stimulation: from feasibility to single-trial analysis.] Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Neuroimage. 2014 Oct 1;99:548-58.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24106008 Conducting polymer electrodes for electroencephalography.] Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG. Adv Healthc Mater. 2014 Apr;3(4):490-3.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24105895 Interictal networks in magnetoencephalography.] Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG. Hum Brain Mapp. 2014 Jun;35(6):2789-805.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24005334 MEG and EEG sensitivity in a case of medial occipital epilepsy.] Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. Brain Topogr. 2014 Jan;27(1):192-6</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Formations_et_AnimationsMEG:Formations et Animations2016-10-13T08:10:07Z<p>JMBadier: </p>
<hr />
<div>__NOTITLE__<br />
= Formations =<br />
<br />
= Le Club MEG =<br />
<br />
=== <span style="color:#4169E1"> Prochaines réunions </span> ===<br />
==== Mardi 5 Mai 2016 14h ==== <br />
'''''ANYWAVE: a software for visualizing and processing EEG/SEEG/MEG/xMG data''''' - '''''Bruno Colombet. Institut de Neuroscience des Systèmes (INS-Marseille) ''''' <br/><br />
<br />
<br />
'''Lieu''' : salle de réunion, 1er étage hôpital Timone, Service de Neurophysiologie Clinique<br />
<br />
=== <span style="color:#4169E1"> Précédentes réunions </span> ===<br />
==== Mardi 5 Avril 2016 14h ==== <br />
'''''The sources of sequential modulations of control processes in arithmetic strategies: A MEG study ''''' - '''''Thomas Hinault. Laboratoire de Psychologie Cognitive (LPC-Marseille) ''''' <br/><br />
In a wide variety of cognitive domains, cognitive performance is determined by which strategies participants use and how they execute these strategies on current problems. We used magnetoencephalography to identify the brain regions and specific time course of dynamic modulations of executive control processes during strategy execution. Participants performed a computational estimation task in which they were instructed to execute a poorer or a better strategy to estimate results of two-digit multiplication problems. When participants were asked to execute poorer strategies, results revealed two distinct patterns of brain activations, depending on whether the poorer strategy (left inferior frontal junction) or the better strategy (anterior cingulate cortex) was executed on the immediately preceding items. Such differences may be the result of proactive preparation on items following poorer strategy items and reactive adjustments following better strategy items. Of genuine interest, the present findings specify the time course of activations of crucial brain areas for sequential modulations of executive control during arithmetic strategy execution.<br />
<br />
==== Mardi 1 mars 2016 14h ==== <br />
'''''The neurophysiology of proactive and reactive action inhibition ''''' - '''''Stefania Ficarella. Laboratoire de Neurosciences Cognitives (LNC-Marseille) ''''' <br/><br />
Action inhibition is often treated as a unitary concept, but recent studies (Aron et al., 2011; Swick et al., 2011) have shown that different brain circuits are involved in different types of action inhibition (for a review see Ridderinkhof, 2014). Particularly, some research groups have investigated the distinction between selective and global action inhibition (Majid et al., 2012) while others have focused on the distinction between proactive and reactive action inhibition (Cai et al., 2011). In this study we aim at investigating, in the same participants, the neurophysiological underpinnings of global and selective, proactive and reactive action inhibition. To do so, we created a Cued Go/NoGo Simon task that, coupled with Electromyographic (EMG) recordinngs of the muscles involved in the responses, informs us on the levels of (selective and global) motor preparation. We will present preliminary behavioral results and expected MEG results.<br />
<br />
References:<br />
<br />
- Aron, A. R. (2011). From reactive to proactive and selective control: developing a richer model for stopping inappropriate responses. Biological Psychiatry, 69 (12), e55–68.<br />
- Cai, W., Oldenkamp, C. L., & Aron, A. R. (2011). A proactive mechanism for selective suppression of response tendencies. The Journal of Neuroscience, 31(16), 5965–9.<br />
- Majid, D.S.A., Cai, W., George, J.S., Verbruggen, F., Aron, A.R. (2012) Transcranial magnetic stimulation reveals dissociable mechanisms for global versus selective cortico-motor suppression underlying the stopping of action. Cerebral Cortex 22:363–371.<br />
- Ridderinkhof, K.R., van den Wildenberg, W.P.M., Brass, M. (2014) “Don׳t” versus “Won׳t”: Principles, mechanisms, and intention in action inhibition.<br />
Neuropsychologia 65:255–262.<br />
- Swick, D., Ashley, V., & Turken, U. (2011). Are the neural correlates of stopping and not going identical? Quantitative meta-analysis of two response inhibition tasks.<br />
NeuroImage, 56(3), 1655–65. <br/><br/><br />
<br />
==== Mardi 26 Janvier 2016 14h ==== <br />
'''''ANOVA II: Analyse multifactorielle des données MEG/EEG ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
A partir d’un exemple d’expérience impliquant deux groupes et deux conditions, nous montreront comment faire l’équivalent d’une ANOVA sans analyse de variance dans Fieldtrip avec des méthodes non paramétriques utilisant les permutations. L’extension à plus de deux groupes et/ou plus de deux conditions sera expliquée en suivant la démarche de l’analyse de variance. Les limites des tests par permutation pour les analyses de variance multifactorielles seront évoquées. ''Les scripts Matlab/Fieldtrip sont disponibles [[MEG:ANOVA dans Fieldtrip|ici]]''.<br/><br />
<br/><pdf width="400" height="280" page="1">File:ANOVA_II_160126.pdf</pdf>[[Media:ANOVA_II_160126.pdf]]<br/><br />
<br/><br />
<br />
==== Mardi 17 novembre 2015 14h ====<br />
'''''ANOVA I: B A BA de l’ANOVA ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
Entre les tests de comparaison deux à deux et les méthodes de régression, à quoi sert l’analyse de variance (ANalysis Of VAriance) ? Nous vous proposons une introduction pour non statisticiens qui démarre avec un rappel intuitif du principe des tests statistiques et qui démystifie les principaux concepts attachés à ce type d’analyse (facteur, inter groupe, intra groupe, interaction, répété, fixé, aléatoire, emboîté, conditions d’application, …). Bien que non appliquée spécialement aux données MEG/EEG, cette présentation permet de comprendre la présentation suivante sur l’analyse multifactorielle des données MEG/EEG. <br/><br />
<br/><pdf width="400" height="280" page="1">File:B_A_BA_de_l_ANOVA_151117.pdf</pdf>[[Media:B_A_BA_de_l_ANOVA_151117.pdf]]<br/><br />
<br/><br />
<br />
= Formations =<br />
<br />
''' <span style="color:#4169E1"> Formation Fieldtrip 11-13 janvier 2016 </span>'''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
[http://www.fieldtriptoolbox.org/workshop/marseille Programme de la formation et tutoriaux]<br />
<br />
= Symposium =</div>JMBadierhttps://meg.univ-amu.fr/wiki/WelcomeWelcome2016-10-13T08:08:56Z<p>JMBadier: </p>
<hr />
<div><br />
== Events == <br />
[[MEG:Formations_et_Animations| '''Prochaine réunion du Club MEG''']]<br />
<br />
<br />
'''Formation Connectivité avec Fieldtrip 21-22 novembre 2016 '''[[File:Fiche annonce - Connectivité en MEG et EEG - 2016.pdf]]<br />
<br />
'''Formation Fieldtrip 11-13 janvier 2016 '''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
== Welcome to the Wiki of the Marseille MEG platform.==<br />
<br />
[[File:MEG figure1.jpg||500px|left]]<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
<br />
Magnetoencephalography (MEG) consists in recording brain magnetic activity. This activity is the counterparts of the electrical activity that originate from the brain, the well-known EEG. These techniques are the only ones that are directly related to the neural activity and have enough time resolution to track brain activity. One of the great advantages of the MEG other EEG is the very small effect of the geometry of the different media of the head, especially the skull, on the signal recorded compared to EEG.<br />
<br /><br />
<br />
=== The MEG platform ===<br />
<br />
<br />
The MEG laboratory of Marseille uses a 248 magnetometers MEG system (4D Neuroimaging magnes 3600), installed within the Neurophysiology department of Timone hospital (Head: F. Bartolomei). The system was co-financed by: Conseil Régional PACA, Conseil Général 13, Conseil Général 06, Marseille Provence Métropole, INSERM, CNRS, INRIA. It is currently co-financed by Aix-Marseille Université (though France Life Imaging) and INSERM.<br />
<br />
The laboratory is equipped with stimulation apparatus that includes video projection and Stax calibrated system for auditory stimulation. It belongs to the Aix-Marseille University and is accessible to all teams involved in fundamental and clinical brain research.<br />
<br />
The research team of the MEG laboratory is specialized in confronting results of source localization to intracerebral EEG (Dubarry et al 2014, Gavaret et al 2004, Koessler et al 2010), and in designing and optimizing signal processing methods for multimodal functional investigation of human cerebral activity (pathological and physiological) (Jmail et al 2011, Krieg et al 2011).<br />
<br />
=== The AnyWave Software ===<br />
<br />
The MEG laboratory is currently developping a software called Anywave for the visualisation and analysis of electrophysiological data: MEG, EEG, SEEG (developper: Bruno Colombet, with help from M. Woodman, Engineer financed by Fondation pour la recherche medicale).<br /><br />
The guiding principles are modularity and cross-platform portability. <br /><br />
See [[AnyWave]].<br />
<br />
=== Staff ===<br />
<br />
<br />
[[JM_Badier|Jean-Michel Badier]], technical director<br />
<br />
Christian Bénar, scientific director<br />
<br />
Sophie Chen, engineer<br />
<br />
Bruno Colombet, software developer<br />
<br />
=== Publications ===<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, & Ziegler JC. Spatio-temporal dynamics of morphological processing in visual word recognition. Journal of Cognitive Neuroscience. In press. <br />
<br />
[http://www.tandfonline.com/doi/full/10.1080/23273798.2015.1071857 On the Cortical Dynamics of Word Production : A Review of the MEG Evidence.]<br />
Munding, D., Dubarry, A.-S., & Alario, F.-X. Lang Cogn Neurosci. 2016. <br />
<br />
[http://www.tandfonline.com/doi/abs/10.1080/23273798.2016.1153117 MEG studies of word production: What next?]<br />
Munding, D., Dubarry, A.-S., & Alario, F.-X. Lang Cogn Neurosci. 2016. <br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/27027543 Spatiotemporal Dynamics of Morphological Processing in Visual Word Recognition.]<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, Ziegler JC. J Cogn Neurosci. 2016 Mar 30:1-15<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/26264375 Ictal Magnetic Source Imaging in Presurgical Assessment.] Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M. Brain Topogr. 2016 Jan;29(1):182-92.<br />
<br />
Brain Topogr. 2016 Jan;29(1):182-92. <br />
[http://www.ncbi.nlm.nih.gov/pubmed/25352165 Magnetic source imaging in posterior cortex epilepsies.] Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Brain Topogr. 2015 Jan;28(1):162-71.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/26377456 Characterization of Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary Visuomotor Mapping.] Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. J Neurosci. 2015 Sep 16;35(37):12643-58.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/25614386 AnyWave: A cross-platform and modular software for visualizing and processing electrophysiological signals.] Colombet B, Woodman M, Badier JM, Bénar CG. J Neurosci Methods. 2015 Jan 19;242C:118-126.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/25262967 Organic electrochemical transistors for clinical applications.] Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P, Malliaras GG. Adv Healthc Mater. 2015 Jan;4(1):142-7.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24862073. Simultaneous recording of MEG, EEG and intracerebral EEG during visual stimulation: from feasibility to single-trial analysis.] Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Neuroimage. 2014 Oct 1;99:548-58.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24106008 Conducting polymer electrodes for electroencephalography.] Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG. Adv Healthc Mater. 2014 Apr;3(4):490-3.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24105895 Interictal networks in magnetoencephalography.] Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG. Hum Brain Mapp. 2014 Jun;35(6):2789-805.<br />
<br />
[http://www.ncbi.nlm.nih.gov/pubmed/24005334 MEG and EEG sensitivity in a case of medial occipital epilepsy.] Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. Brain Topogr. 2014 Jan;27(1):192-6</div>JMBadierhttps://meg.univ-amu.fr/wiki/File:Fiche_annonce_-_Connectivit%C3%A9_en_MEG_et_EEG_-_2016.pdfFile:Fiche annonce - Connectivité en MEG et EEG - 2016.pdf2016-10-13T08:02:28Z<p>JMBadier: </p>
<hr />
<div></div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Formations_et_AnimationsMEG:Formations et Animations2016-04-22T13:10:43Z<p>JMBadier: </p>
<hr />
<div>__NOTITLE__<br />
= Le Club MEG =<br />
<br />
=== <span style="color:#4169E1"> Prochaines réunions </span> ===<br />
==== Mardi 5 Mai 2016 14h ==== <br />
'''''ANYWAVE: a software for visualizing and processing EEG/SEEG/MEG/xMG data''''' - '''''Bruno Colombet. Institut de Neuroscience des Systèmes (INS-Marseille) ''''' <br/><br />
<br />
<br />
'''Lieu''' : salle de réunion, 1er étage hôpital Timone, Service de Neurophysiologie Clinique<br />
<br />
=== <span style="color:#4169E1"> Précédentes réunions </span> ===<br />
==== Mardi 5 Avril 2016 14h ==== <br />
'''''The sources of sequential modulations of control processes in arithmetic strategies: A MEG study ''''' - '''''Thomas Hinault. Laboratoire de Psychologie Cognitive (LPC-Marseille) ''''' <br/><br />
In a wide variety of cognitive domains, cognitive performance is determined by which strategies participants use and how they execute these strategies on current problems. We used magnetoencephalography to identify the brain regions and specific time course of dynamic modulations of executive control processes during strategy execution. Participants performed a computational estimation task in which they were instructed to execute a poorer or a better strategy to estimate results of two-digit multiplication problems. When participants were asked to execute poorer strategies, results revealed two distinct patterns of brain activations, depending on whether the poorer strategy (left inferior frontal junction) or the better strategy (anterior cingulate cortex) was executed on the immediately preceding items. Such differences may be the result of proactive preparation on items following poorer strategy items and reactive adjustments following better strategy items. Of genuine interest, the present findings specify the time course of activations of crucial brain areas for sequential modulations of executive control during arithmetic strategy execution.<br />
<br />
==== Mardi 1 mars 2016 14h ==== <br />
'''''The neurophysiology of proactive and reactive action inhibition ''''' - '''''Stefania Ficarella. Laboratoire de Neurosciences Cognitives (LNC-Marseille) ''''' <br/><br />
Action inhibition is often treated as a unitary concept, but recent studies (Aron et al., 2011; Swick et al., 2011) have shown that different brain circuits are involved in different types of action inhibition (for a review see Ridderinkhof, 2014). Particularly, some research groups have investigated the distinction between selective and global action inhibition (Majid et al., 2012) while others have focused on the distinction between proactive and reactive action inhibition (Cai et al., 2011). In this study we aim at investigating, in the same participants, the neurophysiological underpinnings of global and selective, proactive and reactive action inhibition. To do so, we created a Cued Go/NoGo Simon task that, coupled with Electromyographic (EMG) recordinngs of the muscles involved in the responses, informs us on the levels of (selective and global) motor preparation. We will present preliminary behavioral results and expected MEG results.<br />
<br />
References:<br />
<br />
- Aron, A. R. (2011). From reactive to proactive and selective control: developing a richer model for stopping inappropriate responses. Biological Psychiatry, 69 (12), e55–68.<br />
- Cai, W., Oldenkamp, C. L., & Aron, A. R. (2011). A proactive mechanism for selective suppression of response tendencies. The Journal of Neuroscience, 31(16), 5965–9.<br />
- Majid, D.S.A., Cai, W., George, J.S., Verbruggen, F., Aron, A.R. (2012) Transcranial magnetic stimulation reveals dissociable mechanisms for global versus selective cortico-motor suppression underlying the stopping of action. Cerebral Cortex 22:363–371.<br />
- Ridderinkhof, K.R., van den Wildenberg, W.P.M., Brass, M. (2014) “Don׳t” versus “Won׳t”: Principles, mechanisms, and intention in action inhibition.<br />
Neuropsychologia 65:255–262.<br />
- Swick, D., Ashley, V., & Turken, U. (2011). Are the neural correlates of stopping and not going identical? Quantitative meta-analysis of two response inhibition tasks.<br />
NeuroImage, 56(3), 1655–65. <br/><br/><br />
<br />
==== Mardi 26 Janvier 2016 14h ==== <br />
'''''ANOVA II: Analyse multifactorielle des données MEG/EEG ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
A partir d’un exemple d’expérience impliquant deux groupes et deux conditions, nous montreront comment faire l’équivalent d’une ANOVA sans analyse de variance dans Fieldtrip avec des méthodes non paramétriques utilisant les permutations. L’extension à plus de deux groupes et/ou plus de deux conditions sera expliquée en suivant la démarche de l’analyse de variance. Les limites des tests par permutation pour les analyses de variance multifactorielles seront évoquées. ''Les scripts Matlab/Fieldtrip sont disponibles [[MEG:ANOVA dans Fieldtrip|ici]]''.<br/><br />
<br/><pdf width="400" height="280" page="1">File:ANOVA_II_160126.pdf</pdf>[[Media:ANOVA_II_160126.pdf]]<br/><br />
<br/><br />
<br />
==== Mardi 17 novembre 2015 14h ====<br />
'''''ANOVA I: B A BA de l’ANOVA ''''' - '''''Bernard Giusiano. INS ''''' <br/><br />
Entre les tests de comparaison deux à deux et les méthodes de régression, à quoi sert l’analyse de variance (ANalysis Of VAriance) ? Nous vous proposons une introduction pour non statisticiens qui démarre avec un rappel intuitif du principe des tests statistiques et qui démystifie les principaux concepts attachés à ce type d’analyse (facteur, inter groupe, intra groupe, interaction, répété, fixé, aléatoire, emboîté, conditions d’application, …). Bien que non appliquée spécialement aux données MEG/EEG, cette présentation permet de comprendre la présentation suivante sur l’analyse multifactorielle des données MEG/EEG. <br/><br />
<br/><pdf width="400" height="280" page="1">File:B_A_BA_de_l_ANOVA_151117.pdf</pdf>[[Media:B_A_BA_de_l_ANOVA_151117.pdf]]<br/><br />
<br/><br />
<br />
= Formations =<br />
<br />
''' <span style="color:#4169E1"> Formation Fieldtrip 11-13 janvier 2016 </span>'''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
[http://www.fieldtriptoolbox.org/workshop/marseille Programme de la formation et tutoriaux]<br />
<br />
= Symposium =</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2016-03-25T10:06:25Z<p>JMBadier: ajout ref Maureen 2005</p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2016'''<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, & Ziegler JC. Spatio-temporal dynamics of morphological processing in visual word recognition. Journal of Cognitive Neuroscience. In press.<br />
<br />
<br />
'''2015'''<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
Clerc M, Badier JM, Adde G, Kybic Y, Papadopoulo T. Boundary element formulation for electrical impedance tomography. ESAIM: PROCEEDINGS, Sept 2005, Vol. 14, 63-71.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Formations_et_AnimationsMEG:Formations et Animations2016-03-25T09:42:07Z<p>JMBadier: </p>
<hr />
<div>__NOTITLE__<br />
= Le Club MEG =<br />
<br />
=== <span style="color:#4169E1"> Prochaines réunions </span> ===<br />
''' Mardi 5 Avril 2016 14h ''' <br/> <br />
'''''The sources of sequential modulations of control processes in arithmetic strategies: A MEG study ''''' - '''''Thomas Hinault. Laboratoire de Psychologie Cognitive (LPC-Marseille) ''''' <br/><br />
In a wide variety of cognitive domains, cognitive performance is determined by which strategies participants use and how they execute these strategies on current problems. We used magnetoencephalography to identify the brain regions and specific time course of dynamic modulations of executive control processes during strategy execution. Participants performed a computational estimation task in which they were instructed to execute a poorer or a better strategy to estimate results of two-digit multiplication problems. When participants were asked to execute poorer strategies, results revealed two distinct patterns of brain activations, depending on whether the poorer strategy (left inferior frontal junction) or the better strategy (anterior cingulate cortex) was executed on the immediately preceding items. Such differences may be the result of proactive preparation on items following poorer strategy items and reactive adjustments following better strategy items. Of genuine interest, the present findings specify the time course of activations of crucial brain areas for sequential modulations of executive control during arithmetic strategy execution.<br />
<br />
'''Lieu''' : salle de réunion, 1er étage hôpital Timone, Service de Neurophysiologie Clinique<br />
<br />
=== <span style="color:#4169E1"> Précédentes réunions </span> ===<br />
''' Mardi 1 mars 2016 14h ''' <br/> <br />
'''''The neurophysiology of proactive and reactive action inhibition ''''' - '''''Stefania Ficarella. Laboratoire de Neurosciences Cognitives (LNC-Marseille) ''''' <br/><br />
Action inhibition is often treated as a unitary concept, but recent studies (Aron et al., 2011; Swick et al., 2011) have shown that different brain circuits are involved in different types of action inhibition (for a review see Ridderinkhof, 2014). Particularly, some research groups have investigated the distinction between selective and global action inhibition (Majid et al., 2012) while others have focused on the distinction between proactive and reactive action inhibition (Cai et al., 2011). In this study we aim at investigating, in the same participants, the neurophysiological underpinnings of global and selective, proactive and reactive action inhibition. To do so, we created a Cued Go/NoGo Simon task that, coupled with Electromyographic (EMG) recordinngs of the muscles involved in the responses, informs us on the levels of (selective and global) motor preparation. We will present preliminary behavioral results and expected MEG results.<br />
<br />
References:<br />
<br />
- Aron, A. R. (2011). From reactive to proactive and selective control: developing a richer model for stopping inappropriate responses. Biological Psychiatry, 69 (12), e55–68.<br />
- Cai, W., Oldenkamp, C. L., & Aron, A. R. (2011). A proactive mechanism for selective suppression of response tendencies. The Journal of Neuroscience, 31(16), 5965–9.<br />
- Majid, D.S.A., Cai, W., George, J.S., Verbruggen, F., Aron, A.R. (2012) Transcranial magnetic stimulation reveals dissociable mechanisms for global versus selective cortico-motor suppression underlying the stopping of action. Cerebral Cortex 22:363–371.<br />
- Ridderinkhof, K.R., van den Wildenberg, W.P.M., Brass, M. (2014) “Don׳t” versus “Won׳t”: Principles, mechanisms, and intention in action inhibition.<br />
Neuropsychologia 65:255–262.<br />
- Swick, D., Ashley, V., & Turken, U. (2011). Are the neural correlates of stopping and not going identical? Quantitative meta-analysis of two response inhibition tasks.<br />
NeuroImage, 56(3), 1655–65. <br/><br />
<br />
''' Mardi 26 Janvier 2016 14h ''' <br/> <br />
'''''ANOVA II: Analyse multifactorielle des données MEG/EEG ''''' - '''''Bernard Guisiano. INS ''''' <br/><br />
A partir d’un exemple d’expérience impliquant deux groupes et deux conditions, nous montreront comment faire l’équivalent d’une ANOVA sans analyse de variance dans Fieldtrip avec des méthodes non paramétriques utilisant les permutations. L’extension à plus de deux groupes et/ou plus de deux conditions sera expliquée en suivant la démarche de l’analyse de variance. Les limites des tests par permutation pour les analyses de variance multifactorielles seront évoquées. <br/><br/><br />
<br />
''' Mardi 17 novembre 2015 14h ''' <br/> <br />
'''''ANOVA I: B A BA de l’ANOVA ''''' - '''''Bernard Guisiano. INS ''''' <br/><br />
Entre les tests de comparaison deux à deux et les méthodes de régression, à quoi sert l’analyse de variance (ANalysis Of VAriance) ? Nous vous proposons une introduction pour non statisticiens qui démarre avec un rappel intuitif du principe des tests statistiques et qui démystifie les principaux concepts attachés à ce type d’analyse (facteur, inter groupe, intra groupe, interaction, répété, fixé, aléatoire, emboîté, conditions d’application, …). Bien que non appliquée spécialement aux données MEG/EEG, cette présentation permet de comprendre la présentation suivante sur l’analyse multifactorielle des données MEG/EEG. <br/><br />
<pdf>File:Baba_anova_1.pdf</pdf><br />
<br />
= Formations =<br />
<br />
''' <span style="color:#4169E1"> Formation Fieldtrip 11-13 janvier 2016 </span>'''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
[http://www.fieldtriptoolbox.org/workshop/marseille Programme de la formation et tutoriaux]<br />
<br />
= Symposium =</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2016-03-11T08:59:31Z<p>JMBadier: publi Eddy</p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2016'''<br />
<br />
Cavalli E, Colé P, Badier JM, Zielinski C, Chanoine V, & Ziegler JC. Spatio-temporal dynamics of morphological processing in visual word recognition. Journal of Cognitive Neuroscience. In press.<br />
<br />
<br />
'''2015'''<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Formations_et_AnimationsMEG:Formations et Animations2016-02-22T13:23:13Z<p>JMBadier: changement de date</p>
<hr />
<div>= Le Club MEG =<br />
<br />
=== <span style="color:#4169E1"> Prochaines réunions </span> ===<br />
''' Mardi 1 mars 2016 14h ''' <br/> <br />
'''''The neurophysiology of proactive and reactive action inhibition ''''' - '''''Stefania Ficarella. Laboratoire de Neurosciences Cognitives (LNC-Marseille) ''''' <br/><br />
Action inhibition is often treated as a unitary concept, but recent studies (Aron et al., 2011; Swick et al., 2011) have shown that different brain circuits are involved in different types of action inhibition (for a review see Ridderinkhof, 2014). Particularly, some research groups have investigated the distinction between selective and global action inhibition (Majid et al., 2012) while others have focused on the distinction between proactive and reactive action inhibition (Cai et al., 2011). In this study we aim at investigating, in the same participants, the neurophysiological underpinnings of global and selective, proactive and reactive action inhibition. To do so, we created a Cued Go/NoGo Simon task that, coupled with Electromyographic (EMG) recordinngs of the muscles involved in the responses, informs us on the levels of (selective and global) motor preparation. We will present preliminary behavioral results and expected MEG results.<br />
<br />
References:<br />
<br />
- Aron, A. R. (2011). From reactive to proactive and selective control: developing a richer model for stopping inappropriate responses. Biological Psychiatry, 69 (12), e55–68.<br />
- Cai, W., Oldenkamp, C. L., & Aron, A. R. (2011). A proactive mechanism for selective suppression of response tendencies. The Journal of Neuroscience, 31(16), 5965–9.<br />
- Majid, D.S.A., Cai, W., George, J.S., Verbruggen, F., Aron, A.R. (2012) Transcranial magnetic stimulation reveals dissociable mechanisms for global versus selective cortico-motor suppression underlying the stopping of action. Cerebral Cortex 22:363–371.<br />
- Ridderinkhof, K.R., van den Wildenberg, W.P.M., Brass, M. (2014) “Don׳t” versus “Won׳t”: Principles, mechanisms, and intention in action inhibition.<br />
Neuropsychologia 65:255–262.<br />
- Swick, D., Ashley, V., & Turken, U. (2011). Are the neural correlates of stopping and not going identical? Quantitative meta-analysis of two response inhibition tasks.<br />
NeuroImage, 56(3), 1655–65. <br/><br />
'''Lieu''' : salle de réunion, 1er étage hôpital Timone, Service de Neurophysiologie Clinique<br />
<br />
=== <span style="color:#4169E1"> Précédentes réunions </span> ===<br />
''' Mardi 26 Janvier 2016 14h ''' <br/> <br />
'''''ANOVA II: Analyse multifactorielle des données MEG/EEG ''''' - '''''Bernard Guisiano. INS ''''' <br/><br />
A partir d’un exemple d’expérience impliquant deux groupes et deux conditions, nous montreront comment faire l’équivalent d’une ANOVA sans analyse de variance dans Fieldtrip avec des méthodes non paramétriques utilisant les permutations. L’extension à plus de deux groupes et/ou plus de deux conditions sera expliquée en suivant la démarche de l’analyse de variance. Les limites des tests par permutation pour les analyses de variance multifactorielles seront évoquées. <br/><br/><br />
<br />
''' Mardi 17 novembre 2015 14h ''' <br/> <br />
'''''ANOVA I: B A BA de l’ANOVA ''''' - '''''Bernard Guisiano. INS ''''' <br/><br />
Entre les tests de comparaison deux à deux et les méthodes de régression, à quoi sert l’analyse de variance (ANalysis Of VAriance) ? Nous vous proposons une introduction pour non statisticiens qui démarre avec un rappel intuitif du principe des tests statistiques et qui démystifie les principaux concepts attachés à ce type d’analyse (facteur, inter groupe, intra groupe, interaction, répété, fixé, aléatoire, emboîté, conditions d’application, …). Bien que non appliquée spécialement aux données MEG/EEG, cette présentation permet de comprendre la présentation suivante sur l’analyse multifactorielle des données MEG/EEG. <br/><br />
[[File:Baba_anova_1.pdf]]<br />
<br />
= Formations =<br />
<br />
''' <span style="color:#4169E1"> Formation Fieldtrip 11-13 janvier 2016 </span>'''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
<br />
<br />
= Symposium =</div>JMBadierhttps://meg.univ-amu.fr/wiki/MEG:Formations_et_AnimationsMEG:Formations et Animations2016-01-27T12:14:40Z<p>JMBadier: annonce du ClubMeg du 9 février</p>
<hr />
<div>= Le Club MEG =<br />
<br />
=== <span style="color:#4169E1"> Prochaines réunions </span> ===<br />
''' Mardi 9 février 2016 14h ''' <br/> <br />
'''''The neurophysiology of proactive and reactive action inhibition ''''' - '''''Stefania Ficarella. Laboratoire de Neurosciences Cognitives (LNC-Marseille) ''''' <br/><br />
Action inhibition is often treated as a unitary concept, but recent studies (Aron et al., 2011; Swick et al., 2011) have shown that different brain circuits are involved in different types of action inhibition (for a review see Ridderinkhof, 2014). Particularly, some research groups have investigated the distinction between selective and global action inhibition (Majid et al., 2012) while others have focused on the distinction between proactive and reactive action inhibition (Cai et al., 2011). In this study we aim at investigating, in the same participants, the neurophysiological underpinnings of global and selective, proactive and reactive action inhibition. To do so, we created a Cued Go/NoGo Simon task that, coupled with Electromyographic (EMG) recordinngs of the muscles involved in the responses, informs us on the levels of (selective and global) motor preparation. We will present preliminary behavioral results and expected MEG results.<br />
<br />
References:<br />
<br />
- Aron, A. R. (2011). From reactive to proactive and selective control: developing a richer model for stopping inappropriate responses. Biological Psychiatry, 69 (12), e55–68.<br />
- Cai, W., Oldenkamp, C. L., & Aron, A. R. (2011). A proactive mechanism for selective suppression of response tendencies. The Journal of Neuroscience, 31(16), 5965–9.<br />
- Majid, D.S.A., Cai, W., George, J.S., Verbruggen, F., Aron, A.R. (2012) Transcranial magnetic stimulation reveals dissociable mechanisms for global versus selective cortico-motor suppression underlying the stopping of action. Cerebral Cortex 22:363–371.<br />
- Ridderinkhof, K.R., van den Wildenberg, W.P.M., Brass, M. (2014) “Don׳t” versus “Won׳t”: Principles, mechanisms, and intention in action inhibition.<br />
Neuropsychologia 65:255–262.<br />
- Swick, D., Ashley, V., & Turken, U. (2011). Are the neural correlates of stopping and not going identical? Quantitative meta-analysis of two response inhibition tasks.<br />
NeuroImage, 56(3), 1655–65. <br/><br />
'''Lieu''' : salle de réunion, 1er étage hôpital Timone, Service de Neurophysiologie Clinique<br />
<br />
=== <span style="color:#4169E1"> Précédentes réunions </span> ===<br />
''' Mardi 26 Janvier 2016 14h ''' <br/> <br />
'''''ANOVA II: Analyse multifactorielle des données MEG/EEG ''''' - '''''Bernard Guisiano. INS ''''' <br/><br />
A partir d’un exemple d’expérience impliquant deux groupes et deux conditions, nous montreront comment faire l’équivalent d’une ANOVA sans analyse de variance dans Fieldtrip avec des méthodes non paramétriques utilisant les permutations. L’extension à plus de deux groupes et/ou plus de deux conditions sera expliquée en suivant la démarche de l’analyse de variance. Les limites des tests par permutation pour les analyses de variance multifactorielles seront évoquées. <br/><br/><br />
<br />
''' Mardi 17 novembre 2015 14h ''' <br/> <br />
'''''ANOVA I: B A BA de l’ANOVA ''''' - '''''Bernard Guisiano. INS ''''' <br/><br />
Entre les tests de comparaison deux à deux et les méthodes de régression, à quoi sert l’analyse de variance (ANalysis Of VAriance) ? Nous vous proposons une introduction pour non statisticiens qui démarre avec un rappel intuitif du principe des tests statistiques et qui démystifie les principaux concepts attachés à ce type d’analyse (facteur, inter groupe, intra groupe, interaction, répété, fixé, aléatoire, emboîté, conditions d’application, …). Bien que non appliquée spécialement aux données MEG/EEG, cette présentation permet de comprendre la présentation suivante sur l’analyse multifactorielle des données MEG/EEG. <br/><br />
[[File:Baba_anova_1.pdf]]<br />
<br />
= Formations =<br />
<br />
''' <span style="color:#4169E1"> Formation Fieldtrip 11-13 janvier 2016 </span>'''[[File:Formation fieldtrip2016.JPG|40px]]<br />
<br />
<br />
<br />
= Symposium =</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2016-01-04T12:22:53Z<p>JMBadier: </p>
<hr />
<div>'''Current situation:'''<br />
Ingénieur de Recherche Hors Classe (Research Engineer). <br />
Technical Director of the MEG laboratory.<br />
Biomedical engineer and PhD in computer sciences from the Université de Technologie de Compiègne (UTC. France)<br />
<br />
'''Main current research interests:''' <br />
- Localization of the sources of brain activities. Applications to the exploration of epileptic patients.<br />
- Signal processing and mutimodal recordings (MEG, EEG and depth EEG).<br />
- Developement of new sensors.<br />
<br />
<br />
'''Publications :'''<br />
<br />
'''2015'''<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2015-10-15T09:48:08Z<p>JMBadier: </p>
<hr />
<div><br />
<br />
'''Publications :'''<br />
<br />
'''2015'''<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2015-10-15T09:47:20Z<p>JMBadier: </p>
<hr />
<div>CV Jean-Michel Badier<br />
<br />
'''Publications :'''<br />
<br />
'''2015'''<br />
<br />
Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
'''2014'''<br />
<br />
Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
'''2011'''<br />
<br />
Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
'''2010'''<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
'''2009'''<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
'''2008'''<br />
<br />
Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
'''2007'''<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
'''2006'''<br />
<br />
Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
'''2005'''<br />
<br />
Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
<br />
'''2004'''<br />
<br />
Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
'''2003'''<br />
<br />
Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
'''2001'''<br />
<br />
Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
'''1999'''<br />
<br />
Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
'''1998'''<br />
<br />
Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
congruence of metabolic and electromagnetic activation signals during a<br />
self-paced motor task: a combined PET-MEG study. Neuroimage. 1998 May;7(4 Pt<br />
1):337-51. PubMed PMID: 9626674.<br />
<br />
<br />
'''1997'''<br />
<br />
Wendling F, Carrault G, Badier JM. Segmentation of depth-EEG seizure signals:<br />
method based on a physiological parameter and comparative study. Ann Biomed Eng. <br />
1997 Nov-Dec;25(6):1026-39. PubMed PMID: 9395048.<br />
<br />
<br />
Wendling F, Badier JM, Chauvel P, Coatrieux JL. A method to quantify<br />
invariant information in depth-recorded epileptic seizures. Electroencephalogr<br />
Clin Neurophysiol. 1997 Jun;102(6):472-85. PubMed PMID: 9216480.<br />
<br />
<br />
'''1996'''<br />
<br />
Wendling F, Bellanger JJ, Badier JM, Coatrieux JL. Extraction of<br />
spatio-temporal signatures from depth EEG seizure signals based on objective<br />
matching in warped vectorial observations. IEEE Trans Biomed Eng. 1996<br />
Oct;43(10):990-1000. PubMed PMID: 9214816.<br />
<br />
<br />
'''1995'''<br />
<br />
Liégeois-Chauvel C, Laguitton V, Badier JM, Schwartz D, Chauvel P. [Cortical <br />
mechanisms of auditive perception in man: contribution of cerebral potentials and<br />
evoked magnetic fields by auditive stimulations]. Rev Neurol (Paris). 1995<br />
Aug-Sep;151(8-9):495-504. French. PubMed PMID: 8578070.<br />
<br />
<br />
Badier JM, Chauvel P. Spatio-temporal characteristics of paroxysmal<br />
interictal events in human temporal lobe epilepsy. J Physiol Paris.<br />
1995;89(4-6):255-64. PubMed PMID: 8861824.<br />
<br />
<br />
'''1994'''<br />
<br />
Liégeois-Chauvel C, Musolino A, Badier JM, Marquis P, Chauvel P. Evoked<br />
potentials recorded from the auditory cortex in man: evaluation and topography of<br />
the middle latency components. Electroencephalogr Clin Neurophysiol. 1994<br />
May;92(3):204-14. PubMed PMID: 7514990.<br />
<br />
<br />
'''1991'''<br />
<br />
Nenov VI, Halgren E, Smith ME, Badier JM, Ropchan J, Blahd WH, Mandelkern M. <br />
Localized brain metabolic response correlated with potentials evoked by words.<br />
Behav Brain Res. 1991 Jul 1;44(1):101-4. PubMed PMID: 1910564.<br />
<br />
<br />
'''1987'''<br />
<br />
Chauvel P, Buser P, Badier JM, Liegeois-Chauvel C, Marquis P, Bancaud J. [The<br />
"epileptogenic zone" in humans: representation of intercritical events by<br />
spatio-temporal maps]. Rev Neurol (Paris). 1987;143(5):443-50. French. PubMed<br />
PMID: 3659724.</div>JMBadierhttps://meg.univ-amu.fr/wiki/JM_BadierJM Badier2015-10-14T15:29:46Z<p>JMBadier: CV_JMB</p>
<hr />
<div>CV Jean-Michel Badier<br />
<br />
'''Publications :'''<br />
<br />
1: Takamatsu S, Lonjaret T, Crisp D, Badier JM, Malliaras GG, Ismailova E. Direct<br />
patterning of organic conductors on knitted textiles for long-term<br />
electrocardiography. Sci Rep. 2015 Oct 8;5:15003. doi: 10.1038/srep15003. PubMed <br />
PMID: 26446346.<br />
<br />
<br />
2: Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V. Characterization of<br />
Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary<br />
Visuomotor Mapping. J Neurosci. 2015 Sep 16;35(37):12643-58. doi:<br />
10.1523/JNEUROSCI.4892-14.2015. PubMed PMID: 26377456.<br />
<br />
<br />
3: Badier JM, Bénar CG, Woodman M, Cruto C, Chauvel P, Bartolomei F, Gavaret M.<br />
Ictal Magnetic Source Imaging in Presurgical Assessment. Brain Topogr. 2015 Aug<br />
12. [Epub ahead of print] PubMed PMID: 26264375.<br />
<br />
<br />
4: Colombet B, Woodman M, Badier JM, Bénar CG. AnyWave: a cross-platform and<br />
modular software for visualizing and processing electrophysiological signals. J<br />
Neurosci Methods. 2015 Mar 15;242:118-26. doi: 10.1016/j.jneumeth.2015.01.017.<br />
Epub 2015 Jan 19. PubMed PMID: 25614386.<br />
<br />
<br />
5: Badier JM, Bartolomei F, Chauvel P, Bénar CG, Gavaret M. Magnetic source<br />
imaging in posterior cortex epilepsies. Brain Topogr. 2015 Jan;28(1):162-71. doi:<br />
10.1007/s10548-014-0412-4. Epub 2014 Oct 29. PubMed PMID: 25352165.<br />
<br />
<br />
6: Leleux P, Rivnay J, Lonjaret T, Badier JM, Bénar C, Hervé T, Chauvel P,<br />
Malliaras GG. Organic electrochemical transistors for clinical applications. Adv <br />
Healthc Mater. 2015 Jan 7;4(1):142-7. doi: 10.1002/adhm.201400356. Epub 2014 Sep <br />
29. PubMed PMID: 25262967.<br />
<br />
<br />
7: Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei<br />
F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar CG. Simultaneous<br />
recording of MEG, EEG and intracerebral EEG during visual stimulation: from<br />
feasibility to single-trial analysis. Neuroimage. 2014 Oct 1;99:548-58. doi:<br />
10.1016/j.neuroimage.2014.05.055. Epub 2014 May 23. PubMed PMID: 24862073.<br />
<br />
<br />
8: Leleux P, Badier JM, Rivnay J, Bénar C, Hervé T, Chauvel P, Malliaras GG.<br />
Conducting polymer electrodes for electroencephalography. Adv Healthc Mater. 2014<br />
Apr;3(4):490-3. doi: 10.1002/adhm.201300311. Epub 2013 Sep 19. PubMed PMID:<br />
24106008.<br />
<br />
<br />
9: Malinowska U, Badier JM, Gavaret M, Bartolomei F, Chauvel P, Bénar CG.<br />
Interictal networks in magnetoencephalography. Hum Brain Mapp. 2014<br />
Jun;35(6):2789-805. doi: 10.1002/hbm.22367. Epub 2013 Sep 18. PubMed PMID:<br />
24105895.<br />
<br />
<br />
10: Gavaret M, Badier JM, Bartolomei F, Bénar CG, Chauvel P. MEG and EEG<br />
sensitivity in a case of medial occipital epilepsy. Brain Topogr. 2014<br />
Jan;27(1):192-6. doi: 10.1007/s10548-013-0317-7. Epub 2013 Sep 5. PubMed PMID:<br />
24005334.<br />
<br />
<br />
11: Jmail N, Gavaret M, Wendling F, Kachouri A, Hamadi G, Badier JM, Bénar CG. A <br />
comparison of methods for separation of transient and oscillatory signals in EEG.<br />
J Neurosci Methods. 2011 Aug 15;199(2):273-89. doi:<br />
10.1016/j.jneumeth.2011.04.028. Epub 2011 May 10. PubMed PMID: 21596061.<br />
<br />
<br />
12: Cosandier-Rimélé D, Merlet I, Bartolomei F, Badier JM, Wendling F.<br />
Computational modeling of epileptic activity: from cortical sources to EEG<br />
signals. J Clin Neurophysiol. 2010 Dec;27(6):465-70. doi:<br />
10.1097/WNP.0b013e3182005dcd. PubMed PMID: 21076321.<br />
<br />
<br />
13: Koessler L, Benar C, Maillard L, Badier JM, Vignal JP, Bartolomei F, Chauvel <br />
P, Gavaret M. Source localization of ictal epileptic activity investigated by<br />
high resolution EEG and validated by SEEG. Neuroimage. 2010 Jun;51(2):642-53.<br />
doi: 10.1016/j.neuroimage.2010.02.067. Epub 2010 Mar 4. PubMed PMID: 20206700.<br />
<br />
<br />
14: Gavaret M, Trébuchon A, Bartolomei F, Marquis P, McGonigal A, Wendling F,<br />
Regis J, Badier JM, Chauvel P. Source localization of scalp-EEG interictal spikes<br />
in posterior cortex epilepsies investigated by HR-EEG and SEEG. Epilepsia. 2009<br />
Feb;50(2):276-89. doi: 10.1111/j.1528-1167.2008.01742.x. Epub 2008 Aug 19. PubMed<br />
PMID: 18717708.<br />
<br />
<br />
15: Cosandier-Rimélé D, Merlet I, Badier JM, Chauvel P, Wendling F. The neuronal <br />
sources of EEG: modeling of simultaneous scalp and intracerebral recordings in<br />
epilepsy. Neuroimage. 2008 Aug 1;42(1):135-46. doi:<br />
10.1016/j.neuroimage.2008.04.185. Epub 2008 Apr 25. PubMed PMID: 18515148.<br />
<br />
<br />
16: Gavaret M, Badier JM, Chauvel P. [High-resolution EEG (HR-EEG) and<br />
magnetoencephalography (MEG)]. Neurochirurgie. 2008 May;54(3):185-90. doi:<br />
10.1016/j.neuchi.2008.02.014. Epub 2008 Apr 15. Review. French. PubMed PMID:<br />
18417162.<br />
<br />
<br />
17: Péchaud M, Keriven R, Papadopoulo T, Badier JM. Combinatorial optimization<br />
for electrode labeling of EEG caps. Med Image Comput Comput Assist Interv.<br />
2007;10(Pt 2):793-800. PubMed PMID: 18044641.<br />
<br />
<br />
18: Péchaud M, Keriven R, Papadopoulo T, Badier JM. Automatic labeling of EEG<br />
electrodes using combinatorial optimization. Conf Proc IEEE Eng Med Biol Soc.<br />
2007;2007:4398-401. PubMed PMID: 18002979.<br />
<br />
<br />
19: Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. Modeling and<br />
interpretation of scalp-EEG and depth-EEG signals during interictal activity.<br />
Conf Proc IEEE Eng Med Biol Soc. 2007;2007:4277-80. PubMed PMID: 18002947; PubMed<br />
Central PMCID: PMC2140272.<br />
<br />
<br />
20: Badier JM, Cosandier-Rimélé D, Bénar CG, Schwartz D, Chauvel P, Wendling F.<br />
Realistic synthetic background neuronal activity for the analysis of MEG probe<br />
configurations. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2460-3. PubMed PMID:<br />
18002492.<br />
<br />
<br />
21: Cosandier-Rimélé D, Badier JM, Wendling F. A realistic spatiotemporal source <br />
model for EEG activity: application to the reconstruction of epileptic depth-EEG <br />
signals. Conf Proc IEEE Eng Med Biol Soc. 2006;1:4253-6. PubMed PMID: 17946232;<br />
PubMed Central PMCID: PMC2075536.<br />
<br />
<br />
22: Cosandier-Rimélé D, Badier JM, Chauvel P, Wendling F. A physiologically<br />
plausible spatio-temporal model for EEG signals recorded with intracerebral<br />
electrodes in human partial epilepsy. IEEE Trans Biomed Eng. 2007<br />
Mar;54(3):380-8. PubMed PMID: 17355049; PubMed Central PMCID: PMC1978245.<br />
<br />
<br />
23: Bénar CG, Schön D, Grimault S, Nazarian B, Burle B, Roth M, Badier JM,<br />
Marquis P, Liegeois-Chauvel C, Anton JL. Single-trial analysis of oddball<br />
event-related potentials in simultaneous EEG-fMRI. Hum Brain Mapp. 2007<br />
Jul;28(7):602-13. PubMed PMID: 17295312.<br />
<br />
<br />
24: Gavaret M, Badier JM, Marquis P, McGonigal A, Bartolomei F, Regis J, Chauvel <br />
P. Electric source imaging in frontal lobe epilepsy. J Clin Neurophysiol. 2006<br />
Aug;23(4):358-70. PubMed PMID: 16885710.<br />
<br />
<br />
25: Gavaret M, McGonigal A, Badier JM, Chauvel P. Physiology of frontal lobe<br />
seizures: pre-ictal, ictal and inter-ictal relationships. Suppl Clin<br />
Neurophysiol. 2004;57:400-7. Review. PubMed PMID: 16106639.<br />
<br />
<br />
26: Trébuchon-Da Fonseca A, Giraud K, Badier JM, Chauvel P, Liégeois-Chauvel C.<br />
Hemispheric lateralization of voice onset time (VOT) comparison between depth and<br />
scalp EEG recordings. Neuroimage. 2005 Aug 1;27(1):1-14. PubMed PMID: 15896982.<br />
<br />
<br />
27: Gavaret M, Badier JM, Marquis P, Bartolomei F, Chauvel P. Electric source<br />
imaging in temporal lobe epilepsy. J Clin Neurophysiol. 2004<br />
Jul-Aug;21(4):267-82. PubMed PMID: 15509916.<br />
<br />
<br />
28: Bartolomei F, Gavaret M, Badier JM, Marquis P, Chauvel P. [EEG and video-EEG <br />
explorations in refractory partial epilepsy]. Rev Neurol (Paris). 2004 Jun;160<br />
Spec No 1:5S81-90. Review. French. PubMed PMID: 15331953.<br />
<br />
<br />
29: Schwartz DP, Badier JM, Vignal JP, Toulouse P, Scarabin JM, Chauvel P.<br />
Non-supervised spatio-temporal analysis of interictal magnetic spikes: comparison<br />
with intracerebral recordings. Clin Neurophysiol. 2003 Mar;114(3):438-49. PubMed <br />
PMID: 12705424.<br />
<br />
<br />
30: Liégeois-Chauvel C, Giraud K, Badier JM, Marquis P, Chauvel P. Intracerebral <br />
evoked potentials in pitch perception reveal a functional asymmetry of the human <br />
auditory cortex. Ann N Y Acad Sci. 2001 Jun;930:117-32. PubMed PMID: 11458823.<br />
<br />
<br />
31: Bartolomei F, Wendling F, Vignal JP, Kochen S, Bellanger JJ, Badier JM, Le<br />
Bouquin-Jeannes R, Chauvel P. Seizures of temporal lobe epilepsy: identification <br />
of subtypes by coherence analysis using stereo-electro-encephalography. Clin<br />
Neurophysiol. 1999 Oct;110(10):1741-54. PubMed PMID: 10574289.<br />
<br />
<br />
32: Schwartz DP, Badier JM, Bihoué P, Bouliou A. Evaluation of a new MEG-EEG<br />
spatio-temporal localization approach using a realistic source model. Brain<br />
Topogr. 1999 Summer;11(4):279-89. PubMed PMID: 10449259.<br />
<br />
<br />
33: Wendling F, Shamsollahi MB, Badier JM, Bellanger JJ. Time-frequency matching <br />
of warped depth-EEG seizure observations. IEEE Trans Biomed Eng. 1999<br />
May;46(5):601-5. PubMed PMID: 10230138.<br />
<br />
<br />
34: Joliot M, Crivello F, Badier JM, Diallo B, Tzourio N, Mazoyer B. Anatomical<br />
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