Difference between revisions of "AnyWave::CLI"

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(Compute ICA)
(Convert a file)
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anywave --convert --input_file d:\eeg1.trc --output_file eeg1 --output_dir d:\data\vhdr --output_format vhdr --hp 1 --lp 100
 
anywave --convert --input_file d:\eeg1.trc --output_file eeg1 --output_dir d:\data\vhdr --output_format vhdr --hp 1 --lp 100
 
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--output_dir --hp --lp are optional<br/>
  
 
== Compute ICA ==
 
== Compute ICA ==

Revision as of 15:36, 22 February 2019

Command Line Options

AnyWave can execute some operation without any user interactions. This is also useful to batch some operations.

Common options

Option Value Description
--input_file file the file to open.
--output_file file The file to create.
--output_dir folder The output folder where to place files created by the command.
--output_format string The file format to use for output data file (vhdr, EDF, MATLAB, ADES).
--skip_marker string A specific marker to skip when reading data. (rejecting artefacted data).
--hp value The High Pass filter (in Hz) to apply when reading data.
--lp value The Low Pass filter (in Hz) to apply when reading data.
--notch value The notch (in Hz) to apply when reading data.

Convert a file

--convert This option will convert a file to another format.
Example: convert a Micromed EEG file to BrainVision format using a high pass of 1Hz and a low pass of 100Hz

anywave --convert --input_file d:\eeg1.trc --output_file eeg1 --output_dir d:\data\vhdr --output_format vhdr --hp 1 --lp 100

--output_dir --hp --lp are optional

Compute ICA

--ica This option will compute ICA on a specific file.
When using this option you must also specify the following options:
--modality <EEG, SEEG, MEG> The type of channels involved in the computation.
Optional options:
--comp <value> : the number of components (default is all possible components).

Example: compute ICA on a MEG data file and get 50 components, skipping artefacted data.

anywave --ica --input_file d:\c,rfDC  --modality MEG --comp 50 --hp 1 --lp 100 --skip_marker artefact

Note: The example above assumes that a marker file is present along with the data file and contains markers labeled "artefact".